RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 SSR1P43307 286 aaKnown RBP14.39□□□□□ -0.11
IRF3-229ENST00000601373 ALDH7A1P49419 539 aaKnown RBP14.39□□□□□ -0.11
IRF3-229ENST00000601373 ZNF143P52747 638 aaPredicted RBP14.39□□□□□ -0.11
IRF3-229ENST00000601373 BCAR1P56945 870 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 OGDHQ02218 1023 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 ZNF252P-AS1Q0IIN9 211 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 MRPL58Q14197 206 aaKnown RBP14.39□□□□□ -0.11
IRF3-229ENST00000601373 NFE2Q16621 373 aaPredicted RBP14.39□□□□□ -0.11
IRF3-229ENST00000601373 LONRF2Q1L5Z9 754 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 GLE1Q53GS7 698 aaKnown RBP14.39□□□□□ -0.11
IRF3-229ENST00000601373 FAM171A1Q5VUB5 890 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 FUT10Q6P4F1 479 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 SCUBE3Q8IX30 993 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 KATNAL2Q8IYT4 538 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 OR10T2Q8NGX3 314 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 MAIP1Q8WWC4 291 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 RXFP2Q8WXD0 754 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 ZCWPW1Q9H0M4 648 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 CSNK1G1Q9HCP0 422 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 PRDM6Q9NQX0 595 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 MARCH5Q9NX47 278 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 DDX56Q9NY93 547 aaKnown RBP14.39□□□□□ -0.11
IRF3-229ENST00000601373 VCANP13611 3396 aa14.39□□□□□ -0.11
IRF3-229ENST00000601373 FNDC1Q4ZHG4 1894 aaPredicted RBP14.39□□□□□ -0.11
IRF3-229ENST00000601373 TSC2P49815 1807 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 GOLGA6L10A0A0M3HER8 536 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 F8VP50 259 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 H7C4K7 107 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 GABBR2O75899 941 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 FGGP02679 453 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 KRT7P08729 469 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 ITGB8P26012 769 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 PCK1P35558 622 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 MARCKSL1P49006 195 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 MAP3K7CLP57077 242 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 TAS2R40P59535 323 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 RNASE9P60153 205 aaKnown RBP14.38□□□□□ -0.11
IRF3-229ENST00000601373 SMAD3P84022 425 aaKnown RBP14.38□□□□□ -0.11
IRF3-229ENST00000601373 SMARCB1Q12824 385 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 PPIGQ13427 754 aaKnown RBP eCLIP14.38□□□□□ -0.113e-8■■■□□ 15.4
IRF3-229ENST00000601373 VARS2Q5ST30 1063 aaKnown RBP14.38□□□□□ -0.11
IRF3-229ENST00000601373 DCAF12L1Q5VU92 463 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 ZNF280DQ6N043 979 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 POLNQ7Z5Q5 900 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 MTERF4Q7Z6M4 381 aaKnown RBP14.38□□□□□ -0.11
IRF3-229ENST00000601373 CPNE8Q86YQ8 564 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 SPATA2LQ8IUW3 424 aaPredicted RBP14.38□□□□□ -0.11
IRF3-229ENST00000601373 CMTR2Q8IYT2 770 aaKnown RBP14.38□□□□□ -0.11
IRF3-229ENST00000601373 RCOR2Q8IZ40 523 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 SIX6OS1Q8N1H7 587 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 EXD1Q8NHP7 514 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 ZNF689Q96CS4 500 aaPredicted RBP14.38□□□□□ -0.11
IRF3-229ENST00000601373 FUBP3Q96I24 572 aaKnown RBP eCLIP14.38□□□□□ -0.11
IRF3-229ENST00000601373 CDX2Q99626 313 aaPredicted RBP14.38□□□□□ -0.11
IRF3-229ENST00000601373 SMOQ99835 787 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 PNPLA8Q9NP80 782 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 DMAP1Q9NPF5 467 aaPredicted RBP14.38□□□□□ -0.11
IRF3-229ENST00000601373 CNGB3Q9NQW8 809 aa14.38□□□□□ -0.11
IRF3-229ENST00000601373 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.38□□□□□ -0.11
IRF3-229ENST00000601373 V9GYY5 206 aaPredicted RBP14.38□□□□□ -0.11
IRF3-229ENST00000601373 LAMA2P24043 3122 aaKnown RBP14.38□□□□□ -0.11
IRF3-229ENST00000601373 LTBP2Q14767 1821 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 TMEM265A0A087WTH1 108 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 PIK3R2O00459 728 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 KRIT1O00522 736 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 HSF2BPO75031 334 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 BEST1O76090 585 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 ZRANB2O95218 330 aaKnown RBP eCLIP14.37□□□□□ -0.11
IRF3-229ENST00000601373 PYGMP11217 842 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 SDC4P31431 198 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 COPS2P61201 443 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 WDR5P61964 334 aaKnown RBP14.37□□□□□ -0.11
IRF3-229ENST00000601373 MRPS5P82675 430 aaKnown RBP14.37□□□□□ -0.11
IRF3-229ENST00000601373 C2orf54Q08AI8 447 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 ZNF211Q13398 564 aaPredicted RBP14.37□□□□□ -0.11
IRF3-229ENST00000601373 ELF2Q15723 593 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 CTXN3Q4LDR2 81 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 ODF2Q5BJF6 829 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 ANKS3Q6ZW76 656 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 LRRTM3Q86VH5 581 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 SCML4Q8N228 414 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 EMC1Q8N766 993 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 NOA1Q8NC60 698 aaKnown RBP14.37□□□□□ -0.11
IRF3-229ENST00000601373 MAFAQ8NHW3 353 aaPredicted RBP14.37□□□□□ -0.11
IRF3-229ENST00000601373 KHSRPQ92945 711 aaKnown RBP eCLIP14.37□□□□□ -0.11
IRF3-229ENST00000601373 RBM41Q96IZ5 413 aaKnown RBP14.37□□□□□ -0.11
IRF3-229ENST00000601373 FAM161BQ96MY7 647 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 GPR62Q9BZJ7 368 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 CWH43Q9H720 699 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 EHD2Q9NZN4 543 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 MTUS1Q9ULD2 1270 aa14.37□□□□□ -0.11
IRF3-229ENST00000601373 TARSL2A2RTX5 802 aaKnown RBP14.36□□□□□ -0.11
IRF3-229ENST00000601373 FGBP02675 491 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 BDNFP23560 247 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 MCM3P25205 808 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 PTPN9P43378 593 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 TKTL1P51854 596 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 ADIGQ0VDE8 80 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 NAA30Q147X3 362 aaPredicted RBP14.36□□□□□ -0.11
IRF3-229ENST00000601373 CCDC142Q17RM4 750 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms