RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 A0A0A0MRY4 1105 aa17.91■□□□□ 0.46
USE1-208ENST00000600970 ZNF840PA6NDX5 716 aa17.91■□□□□ 0.46
USE1-208ENST00000600970 SCAMP3O14828 347 aaKnown RBP17.91■□□□□ 0.46
USE1-208ENST00000600970 ADAM23O75077 832 aa17.91■□□□□ 0.46
USE1-208ENST00000600970 OLFM2O95897 454 aa17.91■□□□□ 0.46
USE1-208ENST00000600970 TMEM191BP0C7N4 346 aa17.91■□□□□ 0.46
USE1-208ENST00000600970 EIF2DP41214 584 aaKnown RBP17.91■□□□□ 0.46
USE1-208ENST00000600970 SIM1P81133 766 aaPredicted RBP17.91■□□□□ 0.46
USE1-208ENST00000600970 RESTQ13127 1097 aa17.91■□□□□ 0.46
USE1-208ENST00000600970 SPDYCQ5MJ68 293 aa17.91■□□□□ 0.46
USE1-208ENST00000600970 PEAR1Q5VY43 1037 aaPredicted RBP17.91■□□□□ 0.46
USE1-208ENST00000600970 LYSMD4Q5XG99 296 aa17.91■□□□□ 0.46
USE1-208ENST00000600970 LMBRD2Q68DH5 695 aaPredicted RBP17.91■□□□□ 0.46
USE1-208ENST00000600970 RHBDF2Q6PJF5 856 aa17.91■□□□□ 0.46
USE1-208ENST00000600970 HMGB4Q8WW32 186 aa17.91■□□□□ 0.46
USE1-208ENST00000600970 FSCN3Q9NQT6 498 aa17.91■□□□□ 0.46
USE1-208ENST00000600970 SMPD4Q9NXE4 827 aa17.91■□□□□ 0.46
USE1-208ENST00000600970 AKAP13Q12802 2813 aa17.91■□□□□ 0.46
USE1-208ENST00000600970 TCRBV21S2A2A0A5A6 115 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 UPK3BL1B0FP48 263 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 UPK3BL2E5RIL1 263 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 SLC9A3R1O14745 358 aaPredicted RBP17.9■□□□□ 0.46
USE1-208ENST00000600970 GCNT3O95395 438 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 BMP15O95972 392 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 ITPKAP23677 461 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 ANXA13P27216 316 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 DPP6P42658 865 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 CASP5P51878 434 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 CYP27A1Q02318 531 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 BYSLQ13895 437 aaKnown RBP17.9■□□□□ 0.46
USE1-208ENST00000600970 MAPRE1Q15691 268 aaKnown RBP17.9■□□□□ 0.46
USE1-208ENST00000600970 USP49Q70CQ1 688 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 PGBD3Q8N328 593 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 NOC3LQ8WTT2 800 aaKnown RBP17.9■□□□□ 0.46
USE1-208ENST00000600970 DNAJC19Q96DA6 116 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 EPSTI1Q96J88 318 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 CBWD1Q9BRT8 395 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 PCIF1Q9H4Z3 704 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 ARHGEF4Q9NR80 690 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 PI4KAP42356 2102 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 PCDH15Q96QU1 1955 aa17.9■□□□□ 0.46
USE1-208ENST00000600970 TRIM66O15016 1216 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 ABL1P00519 1130 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 OAS1P00973 400 aaKnown RBP17.89■□□□□ 0.45
USE1-208ENST00000600970 CFIP05156 583 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 PDGFRBP09619 1106 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 ADH5P11766 374 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 GAP43P17677 238 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 HOXD12P35452 270 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 GRIA2P42262 883 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 TNFRSF4P43489 277 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 PPP3CCP48454 512 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 NOP14P78316 857 aaKnown RBP17.89■□□□□ 0.45
USE1-208ENST00000600970 KDSRQ06136 332 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 MYO1EQ12965 1108 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 SF3A1Q15459 793 aaKnown RBP17.89■□□□□ 0.45
USE1-208ENST00000600970 DUOXA1Q1HG43 343 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 SYCP3Q8IZU3 236 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 HDDC3Q8N4P3 179 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 PCED1BQ96HM7 432 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 HPDLQ96IR7 371 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 ANKRD36BP1Q96IX9 119 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 INTS13Q9NVM9 706 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 EHD2Q9NZN4 543 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 CFAP97Q9P2B7 532 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 SLC6A14Q9UN76 642 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 PCDHB13Q9Y5F0 798 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 PTPRJQ12913 1337 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 PCNX2A6NKB5 2137 aa17.89■□□□□ 0.45
USE1-208ENST00000600970 F8VP50 259 aa17.88■□□□□ 0.45
USE1-208ENST00000600970 ADH1CP00326 375 aa17.88■□□□□ 0.45
USE1-208ENST00000600970 WARSP23381 471 aaKnown RBP17.88■□□□□ 0.45
USE1-208ENST00000600970 ATXN3P54252 364 aaPredicted RBP17.88■□□□□ 0.45
USE1-208ENST00000600970 FAM193AP78312 1265 aa17.88■□□□□ 0.45
USE1-208ENST00000600970 PHTF2Q8N3S3 785 aa17.88■□□□□ 0.45
USE1-208ENST00000600970 DEFB119Q8N690 84 aa17.88■□□□□ 0.45
USE1-208ENST00000600970 OR5B17Q8NGF7 314 aa17.88■□□□□ 0.45
USE1-208ENST00000600970 CEP76Q8TAP6 659 aa17.88■□□□□ 0.45
USE1-208ENST00000600970 MYCBPAPQ8TBZ2 947 aa17.88■□□□□ 0.45
USE1-208ENST00000600970 TMX3Q96JJ7 454 aa17.88■□□□□ 0.45
USE1-208ENST00000600970 C8orf48Q96LL4 319 aa17.88■□□□□ 0.45
USE1-208ENST00000600970 GTPBP2Q9BX10 602 aaKnown RBP17.88■□□□□ 0.45
USE1-208ENST00000600970 FGFBP2Q9BYJ0 223 aa17.88■□□□□ 0.45
USE1-208ENST00000600970 OLFML3Q9NRN5 406 aa17.88■□□□□ 0.45
USE1-208ENST00000600970 STK17AQ9UEE5 414 aa17.88■□□□□ 0.45
USE1-208ENST00000600970 R3HCC1Q9Y3T6 440 aaKnown RBP17.88■□□□□ 0.45
USE1-208ENST00000600970 FAM221BA6H8Z2 402 aa17.87■□□□□ 0.45
USE1-208ENST00000600970 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.87■□□□□ 0.45
USE1-208ENST00000600970 H0Y626 953 aa17.87■□□□□ 0.45
USE1-208ENST00000600970 TAF4O00268 1085 aa17.87■□□□□ 0.45
USE1-208ENST00000600970 AP5Z1O43299 807 aa17.87■□□□□ 0.45
USE1-208ENST00000600970 TRIM16O95361 564 aa17.87■□□□□ 0.45
USE1-208ENST00000600970 SERPINF2P08697 491 aa17.87■□□□□ 0.45
USE1-208ENST00000600970 MBL2P11226 248 aaPredicted RBP17.87■□□□□ 0.45
USE1-208ENST00000600970 RPL6Q02878 288 aaKnown RBP17.87■□□□□ 0.45
USE1-208ENST00000600970 TAF10Q12962 218 aa17.87■□□□□ 0.45
USE1-208ENST00000600970 MDH1BQ5I0G3 518 aa17.87■□□□□ 0.45
USE1-208ENST00000600970 DDX42Q86XP3 938 aaKnown RBP eCLIP17.87■□□□□ 0.45
USE1-208ENST00000600970 GPD1LQ8N335 351 aa17.87■□□□□ 0.45
USE1-208ENST00000600970 CHCHD4Q8N4Q1 142 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms