RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 IKBKGQ9Y6K9 419 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 PVALEFA0A1B0GWK0 134 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 TRAF5O00463 557 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 TP73O15350 636 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 SPOPO43791 374 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 SORBS2O94875 1100 aaKnown RBP10.24□□□□□ -0.77
NFKB1-212ENST00000600343 KRT5P13647 590 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 CDKL1Q00532 357 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 PPATQ06203 517 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 COL19A1Q14993 1142 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 AKAP4Q5JQC9 854 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 GALNT13Q8IUC8 556 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 LINC00469Q8N7U9 141 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 ALPK1Q96QP1 1244 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 MYD88Q99836 296 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 TDRD1Q9BXT4 1180 aaKnown RBP10.24□□□□□ -0.77
NFKB1-212ENST00000600343 GMIPQ9P107 970 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 KCNN3Q9UGI6 736 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 MYRFQ9Y2G1 1151 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 A2ML1A8K2U0 1454 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 MYH3P11055 1940 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 SLIT1O75093 1534 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 A0A087WZG4 1122 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 A0A1W2PPM1 405 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 WASLO00401 505 aaPredicted RBP10.24□□□□□ -0.77
NFKB1-212ENST00000600343 SNX2O60749 519 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 ACTN1P12814 892 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 NELFEP18615 380 aaKnown RBP10.24□□□□□ -0.77
NFKB1-212ENST00000600343 IL32P24001 234 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 MAGEA4P43358 317 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 ZBED5Q49AG3 693 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 GALNT18Q6P9A2 607 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 DCP2Q8IU60 420 aaKnown RBP10.24□□□□□ -0.77
NFKB1-212ENST00000600343 DEPDC4Q8N2C3 294 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 NPLOC4Q8TAT6 608 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 VMP1Q96GC9 406 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 SMARCAD1Q9H4L7 1026 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 RPF2Q9H7B2 306 aaKnown RBP10.24□□□□□ -0.77
NFKB1-212ENST00000600343 TXNDC16Q9P2K2 825 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 ATPIF1Q9UII2 106 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 PSMD13Q9UNM6 376 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 CHD4Q14839 1912 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 ATP8B3O60423 1300 aa10.24□□□□□ -0.77
NFKB1-212ENST00000600343 SF3B1O75533 1304 aaKnown RBP eCLIP10.24□□□□□ -0.77
NFKB1-212ENST00000600343 TCRBV7S2A1N4TA0A589 114 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 M0QX08 132 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 PLS3P13797 630 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 NAGAP17050 411 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 BMPR1AP36894 532 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 ALDH18A1P54886 795 aaKnown RBP10.23□□□□□ -0.77
NFKB1-212ENST00000600343 FGD3Q5JSP0 725 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 TCHHL1Q5QJ38 904 aaPredicted RBP10.23□□□□□ -0.77
NFKB1-212ENST00000600343 SLC30A10Q6XR72 485 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 GALNT7Q86SF2 657 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 DTX3Q8N9I9 347 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 GLIS3Q8NEA6 775 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 GRIN3AQ8TCU5 1115 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 RIOK1Q9BRS2 568 aaKnown RBP10.23□□□□□ -0.77
NFKB1-212ENST00000600343 GCOM2Q9BZD3 368 aaPredicted RBP10.23□□□□□ -0.77
NFKB1-212ENST00000600343 SLC38A10Q9HBR0 1119 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 SEPT3Q9UH03 358 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 APOBEC2Q9Y235 224 aaKnown RBP10.23□□□□□ -0.77
NFKB1-212ENST00000600343 ATF2P15336 505 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 CTBSQ01459 385 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 RALGPS1Q5JS13 557 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 KRT80Q6KB66 452 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 GUF1Q8N442 669 aaKnown RBP10.23□□□□□ -0.77
NFKB1-212ENST00000600343 KBTBD7Q8WVZ9 684 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 TMA16Q96EY4 203 aaKnown RBP10.23□□□□□ -0.77
NFKB1-212ENST00000600343 RMND5BQ96G75 393 aaPredicted RBP10.23□□□□□ -0.77
NFKB1-212ENST00000600343 SPATA31A3Q5VYP0 1347 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 PRR5-ARHGAP8B1AHC4 643 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 HOXC11O43248 304 aaPredicted RBP10.23□□□□□ -0.77
NFKB1-212ENST00000600343 CSDE1O75534 798 aaKnown RBP10.23□□□□□ -0.77
NFKB1-212ENST00000600343 CAPN1P07384 714 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 M6PRP20645 277 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 ARHGAP8P85298 464 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 OTUD4Q01804 1114 aaKnown RBP10.23□□□□□ -0.77
NFKB1-212ENST00000600343 CAV1Q03135 178 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 CYP1B1Q16678 543 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 DGKDQ16760 1214 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 PGS1Q32NB8 556 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 AARS2Q5JTZ9 985 aaKnown RBP10.23□□□□□ -0.77
NFKB1-212ENST00000600343 ANKRD26P1Q6NSI1 321 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 CYP4F11Q9HBI6 524 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 GIMAP4Q9NUV9 329 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 POMPQ9Y244 141 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 AP4S1Q9Y587 144 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 CCDC61Q9Y6R9 512 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 NCANO14594 1321 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 H3BMQ9 156 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 SCO2O43819 266 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 C8BP07358 591 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 POLR2CP19387 275 aaPredicted RBP10.23□□□□□ -0.77
NFKB1-212ENST00000600343 GRK2P25098 689 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 PTGS2P35354 604 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 CPOXP36551 454 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 MARCKSL1P49006 195 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 CDH15P55291 814 aa10.23□□□□□ -0.77
NFKB1-212ENST00000600343 TBCCQ15814 346 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms