RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 ABL1P00519 1130 aa29.83■■■□□ 2.37
ZNF558-206ENST00000599938 GLULP15104 373 aa29.83■■■□□ 2.37
ZNF558-206ENST00000599938 MAP3K7CLP57077 242 aa29.83■■■□□ 2.37
ZNF558-206ENST00000599938 ZMIZ2Q8NF64 920 aa29.83■■■□□ 2.37
ZNF558-206ENST00000599938 RIN3Q8TB24 985 aa29.83■■■□□ 2.37
ZNF558-206ENST00000599938 MSANTD3Q96H12 275 aa29.83■■■□□ 2.37
ZNF558-206ENST00000599938 NELL2Q99435 816 aa29.83■■■□□ 2.37
ZNF558-206ENST00000599938 HNRNPABQ99729 332 aaKnown RBP29.83■■■□□ 2.37
ZNF558-206ENST00000599938 SRRTQ9BXP5 876 aaKnown RBP29.83■■■□□ 2.37
ZNF558-206ENST00000599938 NUP62CLQ9H1M0 184 aa29.83■■■□□ 2.37
ZNF558-206ENST00000599938 GTSE1Q9NYZ3 720 aa29.83■■■□□ 2.37
ZNF558-206ENST00000599938 RWDD2AQ9UIY3 292 aa29.83■■■□□ 2.37
ZNF558-206ENST00000599938 NDRG2Q9UN36 371 aaKnown RBP29.83■■■□□ 2.37
ZNF558-206ENST00000599938 SHISA7A6NL88 538 aa29.82■■■□□ 2.36
ZNF558-206ENST00000599938 BEST1O76090 585 aa29.82■■■□□ 2.36
ZNF558-206ENST00000599938 FGFR1OPO95684 399 aaKnown RBP29.82■■■□□ 2.36
ZNF558-206ENST00000599938 PFKLP17858 780 aa29.82■■■□□ 2.36
ZNF558-206ENST00000599938 HDCP19113 662 aa29.82■■■□□ 2.36
ZNF558-206ENST00000599938 TNK2Q07912 1038 aa29.82■■■□□ 2.36
ZNF558-206ENST00000599938 USP4Q13107 963 aa29.82■■■□□ 2.36
ZNF558-206ENST00000599938 CUL2Q13617 745 aa29.82■■■□□ 2.36
ZNF558-206ENST00000599938 CC2D1AQ6P1N0 951 aaPredicted RBP29.82■■■□□ 2.36
ZNF558-206ENST00000599938 PDZD8Q8NEN9 1154 aa29.82■■■□□ 2.36
ZNF558-206ENST00000599938 SCAMP5Q8TAC9 235 aa29.82■■■□□ 2.36
ZNF558-206ENST00000599938 TTC8Q8TAM2 541 aa29.82■■■□□ 2.36
ZNF558-206ENST00000599938 FAM3CQ92520 227 aa29.82■■■□□ 2.36
ZNF558-206ENST00000599938 FAM124BQ9H5Z6 455 aaPredicted RBP29.82■■■□□ 2.36
ZNF558-206ENST00000599938 C8orf33Q9H7E9 229 aaPredicted RBP29.82■■■□□ 2.36
ZNF558-206ENST00000599938 CSNK1G1Q9HCP0 422 aa29.82■■■□□ 2.36
ZNF558-206ENST00000599938 LMBRD1Q9NUN5 540 aa29.82■■■□□ 2.36
ZNF558-206ENST00000599938 TNFRSF10BO14763 440 aa29.81■■■□□ 2.36
ZNF558-206ENST00000599938 SOX9P48436 509 aa29.81■■■□□ 2.36
ZNF558-206ENST00000599938 LRMPQ12912 555 aa29.81■■■□□ 2.36
ZNF558-206ENST00000599938 MTF1Q14872 753 aa29.81■■■□□ 2.36
ZNF558-206ENST00000599938 ZNF77Q15935 545 aa29.81■■■□□ 2.36
ZNF558-206ENST00000599938 CLEC20AQ6ZU45 233 aa29.81■■■□□ 2.36
ZNF558-206ENST00000599938 TRIM59Q8IWR1 403 aa29.81■■■□□ 2.36
ZNF558-206ENST00000599938 OVCA2Q8WZ82 227 aa29.81■■■□□ 2.36
ZNF558-206ENST00000599938 ATOH1Q92858 354 aaPredicted RBP29.81■■■□□ 2.36
ZNF558-206ENST00000599938 GKN1Q9NS71 199 aa29.81■■■□□ 2.36
ZNF558-206ENST00000599938 FAM86C1Q9NVL1 165 aa29.81■■■□□ 2.36
ZNF558-206ENST00000599938 ARHGAP26Q9UNA1 814 aa29.81■■■□□ 2.36
ZNF558-206ENST00000599938 NCAM2O15394 837 aa29.8■■■□□ 2.36
ZNF558-206ENST00000599938 CCDC192P0DO97 292 aa29.8■■■□□ 2.36
ZNF558-206ENST00000599938 MLLT6P55198 1093 aaPredicted RBP29.8■■■□□ 2.36
ZNF558-206ENST00000599938 MARSP56192 900 aaKnown RBP29.8■■■□□ 2.36
ZNF558-206ENST00000599938 CETN1Q12798 172 aa29.8■■■□□ 2.36
ZNF558-206ENST00000599938 ANGPT1Q15389 498 aa29.8■■■□□ 2.36
ZNF558-206ENST00000599938 C1orf228Q6PIY5 440 aa29.8■■■□□ 2.36
ZNF558-206ENST00000599938 MLKLQ8NB16 471 aa29.8■■■□□ 2.36
ZNF558-206ENST00000599938 JAKMIP2Q96AA8 810 aa29.8■■■□□ 2.36
ZNF558-206ENST00000599938 HEXIM2Q96MH2 286 aaKnown RBP29.8■■■□□ 2.36
ZNF558-206ENST00000599938 IPO9Q96P70 1041 aaKnown RBP29.8■■■□□ 2.36
ZNF558-206ENST00000599938 MYO16Q9Y6X6 1858 aa29.8■■■□□ 2.36
ZNF558-206ENST00000599938 PMM2O15305 246 aa29.79■■■□□ 2.36
ZNF558-206ENST00000599938 RAD23BP54727 409 aa29.79■■■□□ 2.36
ZNF558-206ENST00000599938 YWHAEP62258 255 aaKnown RBP29.79■■■□□ 2.36
ZNF558-206ENST00000599938 ITPRIPL2Q3MIP1 535 aa29.79■■■□□ 2.36
ZNF558-206ENST00000599938 PPP1R26Q5T8A7 1209 aaPredicted RBP29.79■■■□□ 2.36
ZNF558-206ENST00000599938 TRIM68Q6AZZ1 485 aa29.79■■■□□ 2.36
ZNF558-206ENST00000599938 SLC4A11Q8NBS3 891 aa29.79■■■□□ 2.36
ZNF558-206ENST00000599938 SH3RF2Q8TEC5 729 aa29.79■■■□□ 2.36
ZNF558-206ENST00000599938 TMEM176AQ96HP8 235 aa29.79■■■□□ 2.36
ZNF558-206ENST00000599938 NT5C1BQ96P26 610 aa29.79■■■□□ 2.36
ZNF558-206ENST00000599938 FAM83CQ9BQN1 747 aa29.79■■■□□ 2.36
ZNF558-206ENST00000599938 COMMD8Q9NX08 183 aa29.79■■■□□ 2.36
ZNF558-206ENST00000599938 IL37Q9NZH6 218 aa29.79■■■□□ 2.36
ZNF558-206ENST00000599938 UTP18Q9Y5J1 556 aaKnown RBP eCLIP29.79■■■□□ 2.36
ZNF558-206ENST00000599938 SPECC1L-ADORA2AF8WAN1 911 aa29.78■■■□□ 2.36
ZNF558-206ENST00000599938 P4HA2O15460 535 aa29.78■■■□□ 2.36
ZNF558-206ENST00000599938 OAS1P00973 400 aaKnown RBP29.78■■■□□ 2.36
ZNF558-206ENST00000599938 TBXAS1P24557 533 aaPredicted RBP29.78■■■□□ 2.36
ZNF558-206ENST00000599938 CTHP32929 405 aa29.78■■■□□ 2.36
ZNF558-206ENST00000599938 MAGEA9P43362 315 aa29.78■■■□□ 2.36
ZNF558-206ENST00000599938 FBXO44Q9H4M3 255 aa29.78■■■□□ 2.36
ZNF558-206ENST00000599938 EBF3Q9H4W6 596 aa29.78■■■□□ 2.36
ZNF558-206ENST00000599938 GMIPQ9P107 970 aa29.78■■■□□ 2.36
ZNF558-206ENST00000599938 OLFM2O95897 454 aa29.77■■■□□ 2.36
ZNF558-206ENST00000599938 AFPP02771 609 aaKnown RBP29.77■■■□□ 2.36
ZNF558-206ENST00000599938 KCNH2Q12809 1159 aa29.77■■■□□ 2.36
ZNF558-206ENST00000599938 PDGFRLQ15198 375 aa29.77■■■□□ 2.36
ZNF558-206ENST00000599938 GPRIN1Q7Z2K8 1008 aa29.77■■■□□ 2.36
ZNF558-206ENST00000599938 RALGPS2Q86X27 583 aaPredicted RBP29.77■■■□□ 2.36
ZNF558-206ENST00000599938 CLDN23Q96B33 292 aa29.77■■■□□ 2.36
ZNF558-206ENST00000599938 HPS4Q9NQG7 708 aa29.77■■■□□ 2.36
ZNF558-206ENST00000599938 VPS13AQ96RL7 3174 aa29.76■■■□□ 2.35
ZNF558-206ENST00000599938 FAM92AA1XBS5 289 aa29.76■■■□□ 2.35
ZNF558-206ENST00000599938 ARSAP15289 507 aa29.76■■■□□ 2.35
ZNF558-206ENST00000599938 SLC7A9P82251 487 aa29.76■■■□□ 2.35
ZNF558-206ENST00000599938 C1orf210Q8IVY1 113 aa29.76■■■□□ 2.35
ZNF558-206ENST00000599938 ZNF687Q8N1G0 1237 aa29.76■■■□□ 2.35
ZNF558-206ENST00000599938 CNOT6LQ96LI5 555 aaKnown RBP29.76■■■□□ 2.35
ZNF558-206ENST00000599938 PNPLA8Q9NP80 782 aa29.76■■■□□ 2.35
ZNF558-206ENST00000599938 SPATA6Q9NWH7 488 aaPredicted RBP29.76■■■□□ 2.35
ZNF558-206ENST00000599938 SMPD4Q9NXE4 827 aa29.76■■■□□ 2.35
ZNF558-206ENST00000599938 CHORDC1Q9UHD1 332 aaPredicted RBP29.76■■■□□ 2.35
ZNF558-206ENST00000599938 CPQQ9Y646 472 aa29.76■■■□□ 2.35
ZNF558-206ENST00000599938 CACNA1IQ9P0X4 2223 aa29.76■■■□□ 2.35
ZNF558-206ENST00000599938 TCF3P15923 654 aa29.75■■■□□ 2.35
ZNF558-206ENST00000599938 RPS9P46781 194 aaKnown RBP29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms