RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 OR6B2Q6IFH4 312 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 PRPF39Q86UA1 669 aaKnown RBP15.93■□□□□ 0.14
UPF1-204ENST00000596842 WDTC1Q8N5D0 677 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 PPFIBP2Q8ND30 876 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 INPP5DQ92835 1189 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 THTPAQ9BU02 230 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 FOXP3Q9BZS1 431 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 NIF3L1Q9GZT8 377 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 IQANK1A0A1B0GTG1 560 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 ARHGAP42A6NI28 874 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 TTC36A6NLP5 189 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 M0QYV0 167 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 C2CD2LO14523 706 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 UGT1A9O60656 530 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 OATP04181 439 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 ZCCHC18P0CG32 403 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 CXCL9Q07325 125 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 KLC1Q07866 573 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 C4orf50Q6ZRC1 276 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 TTLL6Q8N841 843 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 SCG3Q8WXD2 468 aaKnown RBP15.93■□□□□ 0.14
UPF1-204ENST00000596842 CPXM1Q96SM3 734 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 ASCC2Q9H1I8 757 aaPredicted RBP15.93■□□□□ 0.14
UPF1-204ENST00000596842 UGT1A7Q9HAW7 530 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 UGT1A10Q9HAW8 530 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 UGT1A8Q9HAW9 530 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 SYNPO2Q9UMS6 1093 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 WASF2Q9Y6W5 498 aa15.93■□□□□ 0.14
UPF1-204ENST00000596842 MEI4A8MW99 385 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 H0YCG3 227 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 FCHO1O14526 889 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 TOM1L1O75674 476 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 SUPT20HL2P0C7V6 817 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 ATP4AP20648 1035 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 KDELR1P24390 212 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 MIPP30301 263 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 POLR2BP30876 1174 aaKnown RBP15.92■□□□□ 0.14
UPF1-204ENST00000596842 CAPSQ13938 189 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 SUPT20HL1Q3ZLR7 823 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 EFHC2Q5JST6 749 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 ISLR2Q6UXK2 745 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 ITFG2Q969R8 447 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 GPRASP2Q96D09 838 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 BTBD10Q9BSF8 475 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 DCLRE1BQ9H816 532 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 MYOZ2Q9NPC6 264 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 DDX56Q9NY93 547 aaKnown RBP15.92■□□□□ 0.14
UPF1-204ENST00000596842 ITGAVP06756 1048 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 CA8P35219 290 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 MCL1Q07820 350 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 CUL3Q13618 768 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 RNF220Q5VTB9 566 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 FBXO41Q8TF61 875 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 HEXIM2Q96MH2 286 aaKnown RBP15.92■□□□□ 0.14
UPF1-204ENST00000596842 ADPGKQ9BRR6 497 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 WDR83Q9BRX9 315 aaKnown RBP15.92■□□□□ 0.14
UPF1-204ENST00000596842 ACSS3Q9H6R3 686 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 GINS2Q9Y248 185 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 UBR3Q6ZT12 1888 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 A0A0B4J269 797 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 E5RJQ4 531 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 ROR1Q01973 937 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 RASA2Q15283 850 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 CCDC124Q96CT7 223 aaKnown RBP15.92■□□□□ 0.14
UPF1-204ENST00000596842 RNF19AQ9NV58 838 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 KANSL3Q9P2N6 904 aa15.92■□□□□ 0.14
UPF1-204ENST00000596842 GSC2O15499 205 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 PLA2G6O60733 806 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 TMED1Q13445 227 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 CHI3L2Q15782 390 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 ABHD15Q6UXT9 468 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 CDHR3Q6ZTQ4 885 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 PCGF5Q86SE9 256 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 FBXO27Q8NI29 283 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 EZH1Q92800 747 aaPredicted RBP15.91■□□□□ 0.14
UPF1-204ENST00000596842 SYT15Q9BQS2 421 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 ASS1P00966 412 aaKnown RBP15.91■□□□□ 0.14
UPF1-204ENST00000596842 KRT7P08729 469 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 LINGO3P0C6S8 592 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 TGFB2P61812 414 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 DPYSL3Q14195 570 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 SRPK1Q96SB4 655 aaKnown RBP15.91■□□□□ 0.14
UPF1-204ENST00000596842 PORCNQ9H237 461 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 PIDD1Q9HB75 910 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 TAS2R1Q9NYW7 299 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 HMGXB4Q9UGU5 601 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 CYTH4Q9UIA0 394 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 B4GALT5O43286 388 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 CREB3O43889 395 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 TNNC2P02585 160 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 GNAZP19086 355 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 AMPD1P23109 780 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 SERPINB4P48594 390 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 KLHL23Q8NBE8 558 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 SLC35B2Q8TB61 432 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 JDP2Q8WYK2 163 aa15.91■□□□□ 0.14
UPF1-204ENST00000596842 DRG1Q9Y295 367 aaKnown RBP15.91■□□□□ 0.14
UPF1-204ENST00000596842 MAGEB2O15479 319 aa15.9■□□□□ 0.14
UPF1-204ENST00000596842 STBD1O95210 358 aa15.9■□□□□ 0.14
UPF1-204ENST00000596842 HSPA1LP34931 641 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms