RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 TULP2O00295 520 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 PRAMEF12O95522 483 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 PAEPP09466 180 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 ZDHHC11BP0C7U3 371 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 VDRP11473 427 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 SRFP11831 508 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 NPR3P17342 541 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 DDX6P26196 483 aaKnown RBP eCLIP16.2■□□□□ 0.18
TRIM47-206ENST00000592942 YWHAQP27348 245 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 IQCB1Q15051 598 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 MFSD6LQ8IWD5 586 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 RIN3Q8TB24 985 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 MRPS31Q92665 395 aaKnown RBP16.2■□□□□ 0.18
TRIM47-206ENST00000592942 UBXN6Q9BZV1 441 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 SMG9Q9H0W8 520 aaKnown RBP16.2■□□□□ 0.18
TRIM47-206ENST00000592942 SLITRK6Q9H5Y7 841 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 APEX2Q9UBZ4 518 aa16.2■□□□□ 0.18
TRIM47-206ENST00000592942 LIMA1Q9UHB6 759 aaKnown RBP16.2■□□□□ 0.18
TRIM47-206ENST00000592942 CHORDC1Q9UHD1 332 aaPredicted RBP16.2■□□□□ 0.18
TRIM47-206ENST00000592942 MYH10P35580 1976 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 TMEM221A6NGB7 291 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 M0R296 226 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 O00370 1275 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 RTN3O95197 1032 aaPredicted RBP16.19■□□□□ 0.18
TRIM47-206ENST00000592942 KIF11P52732 1056 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 ZXDBP98169 803 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 GRM2Q14416 872 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 SGO2Q562F6 1265 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 SNX30Q5VWJ9 437 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 BMP8AQ7Z5Y6 402 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 AOPEPQ8N6M6 819 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 RBBP8NLQ8NC74 664 aaPredicted RBP16.19■□□□□ 0.18
TRIM47-206ENST00000592942 SHC3Q92529 594 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 USP13Q92995 863 aaPredicted RBP16.19■□□□□ 0.18
TRIM47-206ENST00000592942 GCNAQ96QF7 691 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 RNF38Q9H0F5 515 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 PNPLA8Q9NP80 782 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 ACP6Q9NPH0 428 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 EHD2Q9NZN4 543 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 WNT16Q9UBV4 365 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 ZMYM5Q9UJ78 669 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 TSPAN16Q9UKR8 245 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 CCL26Q9Y258 94 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 USP3Q9Y6I4 520 aa16.19■□□□□ 0.18
TRIM47-206ENST00000592942 KRBA1A5PL33 1030 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 GABBR2O75899 941 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 PDGFBP01127 241 aaPredicted RBP16.18■□□□□ 0.18
TRIM47-206ENST00000592942 CFHP08603 1231 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 ATP1A3P13637 1013 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 PSMC3P17980 439 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 TRIM21P19474 475 aaKnown RBP16.18■□□□□ 0.18
TRIM47-206ENST00000592942 PPP3CCP48454 512 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 COPB1P53618 953 aaKnown RBP16.18■□□□□ 0.18
TRIM47-206ENST00000592942 MFAP3P55082 362 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 PDE4CQ08493 712 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 FCHO2Q0JRZ9 810 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 IFRD2Q12894 506 aaPredicted RBP16.18■□□□□ 0.18
TRIM47-206ENST00000592942 CNGA2Q16280 664 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 ZSCAN23Q3MJ62 389 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 RAB41Q5JT25 222 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 KLHDC7AQ5VTJ3 777 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 LCLAT1Q6UWP7 414 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 HFE2Q6ZVN8 426 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 ENOSF1Q7L5Y1 443 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 PIGZQ86VD9 579 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 ARL14EPQ8N8R7 260 aaPredicted RBP16.18■□□□□ 0.18
TRIM47-206ENST00000592942 UBA3Q8TBC4 463 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 OVCA2Q8WZ82 227 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 E2F7Q96AV8 911 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 NAA15Q9BXJ9 866 aaKnown RBP16.18■□□□□ 0.18
TRIM47-206ENST00000592942 DNAI2Q9GZS0 605 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 OBP2AQ9NY56 170 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 TRPM5Q9NZQ8 1165 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 DNAJC12Q9UKB3 198 aa16.18■□□□□ 0.18
TRIM47-206ENST00000592942 SHISA7A6NL88 538 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 PRR33A8MZF0 331 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 ARNTLO00327 626 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 FOXN3O00409 490 aaPredicted RBP16.17■□□□□ 0.18
TRIM47-206ENST00000592942 OLFM2O95897 454 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 OAS1P00973 400 aaKnown RBP16.17■□□□□ 0.18
TRIM47-206ENST00000592942 CD19P15391 556 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 BRD2P25440 801 aaKnown RBP16.17■□□□□ 0.18
TRIM47-206ENST00000592942 KLK7P49862 253 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 ZNF165P49910 485 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 ZNF268Q14587 947 aaPredicted RBP16.17■□□□□ 0.18
TRIM47-206ENST00000592942 ARHGAP44Q17R89 818 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 GOLGA7BQ2TAP0 167 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 SLC35F5Q8WV83 523 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 FBXO32Q969P5 355 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 FAM81BQ96LP2 452 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 SLITRK1Q96PX8 696 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 TRMT61BQ9BVS5 477 aaKnown RBP16.17■□□□□ 0.18
TRIM47-206ENST00000592942 NAT10Q9H0A0 1025 aaKnown RBP16.17■□□□□ 0.18
TRIM47-206ENST00000592942 TDP1Q9NUW8 608 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 OSER1Q9NX31 292 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 GMIPQ9P107 970 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRIM47-206ENST00000592942 SCML2Q9UQR0 700 aa16.17■□□□□ 0.18
TRIM47-206ENST00000592942 NUP210Q8TEM1 1887 aaPredicted RBP16.16■□□□□ 0.18
TRIM47-206ENST00000592942 PFKLP17858 780 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms