RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.36□□□□□ -0.11
CAPNS1-213ENST00000592354 SEMA4GQ9NTN9 838 aa14.36□□□□□ -0.11
CAPNS1-213ENST00000592354 CPQQ9Y646 472 aa14.36□□□□□ -0.11
CAPNS1-213ENST00000592354 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 PRR5-ARHGAP8B1AHC4 643 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 ATG13O75143 517 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 RPP40O75818 363 aaKnown RBP14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 NFATC1O95644 943 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 NR3C1P04150 777 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 CCDC192P0DO97 292 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 TCF3P15923 654 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 HOXA6P31267 233 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 ATXN1P54253 815 aaKnown RBP14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 SEC13P55735 322 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 ARHGAP8P85298 464 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 CEP135Q66GS9 1140 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 PRR23CQ6ZRP0 262 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 GAB3Q8WWW8 586 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 SPATA32Q96LK8 384 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 CEP295NLQ96MC4 621 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 SLITRK1Q96PX8 696 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 KCNK16Q96T55 309 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 RNF38Q9H0F5 515 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 KCTD10Q9H3F6 313 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 KRT82Q9NSB4 513 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 EHD2Q9NZN4 543 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 HMGXB4Q9UGU5 601 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 ATP8B3O60423 1300 aa14.35□□□□□ -0.11
CAPNS1-213ENST00000592354 SPAG17Q6Q759 2223 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 DCDC2BA2VCK2 349 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 ANTXRLA6NF34 631 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 AXIN1O15169 862 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 GDF9O60383 454 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 OLFM2O95897 454 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 OAS1P00973 400 aaKnown RBP14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 C4BPAP04003 597 aaKnown RBP14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 CYP17A1P05093 508 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 CCDC130P13994 396 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 SDHBP21912 280 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 OPRD1P41143 372 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 PIK3CAP42336 1068 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 SLC7A9P82251 487 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 NR1H3Q13133 447 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 DMC1Q14565 340 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 FBXO43Q4G163 708 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 SPOPLQ6IQ16 392 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 ACOT1Q86TX2 421 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 KBTBD6Q86V97 674 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 SCAMP5Q8TAC9 235 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 FBXO32Q969P5 355 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 EXOC4Q96A65 974 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 VRTNQ9H8Y1 702 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 DMAC2Q9NW81 257 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 CFAP97Q9P2B7 532 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 HPSEQ9Y251 543 aa14.34□□□□□ -0.11
CAPNS1-213ENST00000592354 LRP3O75074 770 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 RPN1P04843 607 aaKnown RBP14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 FAM163BP0C2L3 166 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 MBL2P11226 248 aaPredicted RBP14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 PFKLP17858 780 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 YWHAQP27348 245 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 NDUFA8P51970 172 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 AP3M2P53677 418 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 SLC5A3P53794 718 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 CLDN10P78369 228 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 KRT85P78386 507 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 CSRP2Q16527 193 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 GAB4Q2WGN9 574 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 PAQR9Q6ZVX9 377 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 SLC9A9Q8IVB4 645 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 NUP93Q8N1F7 819 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 SMARCD1Q96GM5 515 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 ARRDC1-AS1Q9H2J1 176 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 DMAP1Q9NPF5 467 aaPredicted RBP14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 FAM49BQ9NUQ9 324 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 ZDHHC9Q9Y397 364 aa14.33□□□□□ -0.12
CAPNS1-213ENST00000592354 DCLK1O15075 740 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 COCHO43405 550 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 AP1G2O75843 785 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 CMA1P23946 247 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 SYKP43405 635 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 ASPAP45381 313 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 PPP3CCP48454 512 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 MESP2Q0VG99 397 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 SF3A2Q15428 464 aaKnown RBP14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 ZACNQ401N2 412 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 C2orf27AQ580R0 203 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 SYT13Q7L8C5 426 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 CACNA2D4Q7Z3S7 1137 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 C12orf40Q86WS4 652 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 SFTPA1Q8IWL2 248 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 FUKQ8N0W3 1084 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 CAMKK1Q8N5S9 505 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 PDZD8Q8NEN9 1154 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 NETO1Q8TDF5 533 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 JAKMIP2Q96AA8 810 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 ACDQ96AP0 544 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 TNIP3Q96KP6 325 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 RTKNQ9BST9 563 aa14.32□□□□□ -0.12
CAPNS1-213ENST00000592354 SMOC1Q9H4F8 434 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms