RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 TUBA8Q9NY65 449 aaPredicted RBP11.97□□□□□ -0.49
BCAS3-220ENST00000588720 ETAA1Q9NY74 926 aa11.97□□□□□ -0.49
BCAS3-220ENST00000588720 XPO7Q9UIA9 1087 aaKnown RBP11.97□□□□□ -0.49
BCAS3-220ENST00000588720 ZSCAN5CA6NGD5 496 aaPredicted RBP11.96□□□□□ -0.49
BCAS3-220ENST00000588720 RECQL4O94761 1208 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 FAM107AO95990 144 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 SMIM10L2AP0DMW4 78 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 SMIM10L2BP0DMW5 78 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 BEX3Q00994 111 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 MAP3K10Q02779 954 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 PRAMEF19Q5SWL8 479 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 FOXR1Q6PIV2 292 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 PPIL6Q8IXY8 311 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 EIF1ADQ8N9N8 165 aaKnown RBP11.96□□□□□ -0.49
BCAS3-220ENST00000588720 CATSPER1Q8NEC5 780 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 BCAS3Q9H6U6 928 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 IL1RAPL1Q9NZN1 696 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 MID2Q9UJV3 735 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 ARHGAP42A6NI28 874 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 TULP2O00295 520 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 EEF2KO00418 725 aaKnown RBP11.96□□□□□ -0.49
BCAS3-220ENST00000588720 ARHGEF9O43307 516 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 AP1G2O75843 785 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 HSPA9P38646 679 aaKnown RBP11.96□□□□□ -0.49
BCAS3-220ENST00000588720 OR1G1P47890 313 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 PDK1Q15118 436 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 LONRF1Q17RB8 773 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 DLK2Q6UY11 383 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 FAM172AQ8WUF8 416 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 SGSM3Q96HU1 749 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 HES6Q96HZ4 224 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 SERPINI1Q99574 410 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 FSD1LQ9BXM9 530 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 FRMD8Q9BZ67 464 aaPredicted RBP11.96□□□□□ -0.49
BCAS3-220ENST00000588720 XAB2Q9HCS7 855 aaKnown RBP11.96□□□□□ -0.49
BCAS3-220ENST00000588720 SLC40A1Q9NP59 571 aa11.96□□□□□ -0.49
BCAS3-220ENST00000588720 MICAL2O94851 1124 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 TMCC1O94876 653 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 NCAM1P13591 858 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 KPNA2P52292 529 aaKnown RBP11.96□□□□□ -0.5
BCAS3-220ENST00000588720 HIRAP54198 1017 aaPredicted RBP11.96□□□□□ -0.5
BCAS3-220ENST00000588720 SFSWAPQ12872 951 aaKnown RBP11.96□□□□□ -0.5
BCAS3-220ENST00000588720 FAM71DQ8N9W8 422 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 UPF1Q92900 1129 aaKnown RBP eCLIP11.96□□□□□ -0.5
BCAS3-220ENST00000588720 XPNPEP3Q9NQH7 507 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 GDF3Q9NR23 364 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 RARAP10276 462 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 PAMP19021 973 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 NEK2P51955 445 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 ATG16L1Q676U5 607 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 HELQQ8TDG4 1101 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 CRYGNQ8WXF5 182 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 PARVBQ9HBI1 364 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 CD248Q9HCU0 757 aa11.96□□□□□ -0.5
BCAS3-220ENST00000588720 KPNA7A9QM74 516 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 B4GALT4O60513 344 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 SPAG6O75602 509 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 ACO1P21399 889 aaKnown RBP11.95□□□□□ -0.5
BCAS3-220ENST00000588720 TMED10P49755 219 aaKnown RBP11.95□□□□□ -0.5
BCAS3-220ENST00000588720 RAB27AP51159 221 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 OTUD4Q01804 1114 aaKnown RBP11.95□□□□□ -0.5
BCAS3-220ENST00000588720 ACAP1Q15027 740 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 PTGISQ16647 500 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 SPRYD7Q5W111 196 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 TSHZ1Q6ZSZ6 1077 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 ZDHHC17Q8IUH5 632 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 AENQ8WTP8 325 aaKnown RBP11.95□□□□□ -0.5
BCAS3-220ENST00000588720 ZBED3Q96IU2 234 aaPredicted RBP11.95□□□□□ -0.5
BCAS3-220ENST00000588720 APBA2Q99767 749 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 NRAPQ86VF7 1730 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 ARF4P18085 180 aaPredicted RBP11.95□□□□□ -0.5
BCAS3-220ENST00000588720 ASPHQ12797 758 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 MAMLD1Q13495 774 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 CNGA2Q16280 664 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 PHF13Q86YI8 300 aaPredicted RBP11.95□□□□□ -0.5
BCAS3-220ENST00000588720 ARRDC4Q8NCT1 418 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 TTC17Q96AE7 1141 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 OSBPL1AQ9BXW6 950 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 MLXIPLQ9NP71 852 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 MRPL40Q9NQ50 206 aaKnown RBP11.95□□□□□ -0.5
BCAS3-220ENST00000588720 UTP6Q9NYH9 597 aaKnown RBP11.95□□□□□ -0.5
BCAS3-220ENST00000588720 M0QYT0 321 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 NOMO3P69849 1222 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 FAM167BQ9BTA0 163 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 RNPEPQ9H4A4 650 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 SMYD3Q9H7B4 428 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 DSEQ9UL01 958 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 TRPV2Q9Y5S1 764 aa11.95□□□□□ -0.5
BCAS3-220ENST00000588720 PMM2O15305 246 aa11.94□□□□□ -0.5
BCAS3-220ENST00000588720 C4BPAP04003 597 aaKnown RBP11.94□□□□□ -0.5
BCAS3-220ENST00000588720 ADSSP30520 456 aa11.94□□□□□ -0.5
BCAS3-220ENST00000588720 INAQ16352 499 aa11.94□□□□□ -0.5
BCAS3-220ENST00000588720 KATNAL2Q8IYT4 538 aa11.94□□□□□ -0.5
BCAS3-220ENST00000588720 MSL3Q8N5Y2 521 aaKnown RBP11.94□□□□□ -0.5
BCAS3-220ENST00000588720 ACTL9Q8TC94 416 aa11.94□□□□□ -0.5
BCAS3-220ENST00000588720 TBCBQ99426 244 aa11.94□□□□□ -0.5
BCAS3-220ENST00000588720 DCLK3Q9C098 648 aa11.94□□□□□ -0.5
BCAS3-220ENST00000588720 SMYD2Q9NRG4 433 aa11.94□□□□□ -0.5
BCAS3-220ENST00000588720 ZC3H7BQ9UGR2 993 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms