RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 COMMD8Q9NX08 183 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 HMGXB4Q9UGU5 601 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 AP1G2O75843 785 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 OLFM2O95897 454 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 YWHAQP27348 245 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 SLC7A9P82251 487 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 TAF10Q12962 218 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 ANKRD40Q6AI12 368 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 TXNDC11Q6PKC3 985 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 ASCL5Q7RTU5 278 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 SYNPOQ8N3V7 929 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 KIAA1958Q8N8K9 716 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 TTC8Q8TAM2 541 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 RIN3Q8TB24 985 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 OSCP1Q8WVF1 389 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 EEF2KMTQ96G04 330 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 DHTKD1Q96HY7 919 aaPredicted RBP15.33■□□□□ 0.04
DDX39A-208ENST00000588692 NT5C1AQ9BXI3 368 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 FAM126AQ9BYI3 521 aaPredicted RBP15.33■□□□□ 0.04
DDX39A-208ENST00000588692 EBF3Q9H4W6 596 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 CSNK1G1Q9HCP0 422 aa15.33■□□□□ 0.04
DDX39A-208ENST00000588692 TNFRSF10BO14763 440 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 CILPO75339 1184 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 OAS1P00973 400 aaKnown RBP15.32■□□□□ 0.04
DDX39A-208ENST00000588692 CCDC130P13994 396 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 IFNAR2P48551 515 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 CCR3P51677 355 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 SLC5A3P53794 718 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 CSTF1Q05048 431 aaKnown RBP15.32■□□□□ 0.04
DDX39A-208ENST00000588692 TRIM68Q6AZZ1 485 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 FOXR2Q6PJQ5 311 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 SPEM1Q8N4L4 309 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 CPA6Q8N4T0 437 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 SLC2A14Q8TDB8 520 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 SH3RF2Q8TEC5 729 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 ATP2A3Q93084 1043 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 FBXO32Q969P5 355 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 EXOC4Q96A65 974 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 KCNK16Q96T55 309 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 RAB20Q9NX57 234 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 DUS2Q9NX74 493 aaKnown RBP15.32■□□□□ 0.04
DDX39A-208ENST00000588692 IL37Q9NZH6 218 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 PCDHGA2Q9Y5H1 932 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 R4GN57 208 aa15.32■□□□□ 0.04
DDX39A-208ENST00000588692 MYO16Q9Y6X6 1858 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 FAM92AA1XBS5 289 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 FAM200BP0CF97 657 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 PMS1P54277 932 aaKnown RBP15.31■□□□□ 0.04
DDX39A-208ENST00000588692 IFRD2Q12894 506 aaPredicted RBP15.31■□□□□ 0.04
DDX39A-208ENST00000588692 ORC1Q13415 861 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 CCINQ13939 588 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 PON2Q15165 354 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 DCAF17Q5H9S7 520 aaPredicted RBP15.31■□□□□ 0.04
DDX39A-208ENST00000588692 WDR44Q5JSH3 913 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 TCERG1LQ5VWI1 586 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 DDX42Q86XP3 938 aaKnown RBP eCLIP15.31■□□□□ 0.044e-6■□□□□ 8.2
DDX39A-208ENST00000588692 NELL1Q92832 810 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 CEP63Q96MT8 703 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 HNRNPABQ99729 332 aaKnown RBP15.31■□□□□ 0.04
DDX39A-208ENST00000588692 FBXO44Q9H4M3 255 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 METTL14Q9HCE5 456 aaKnown RBP15.31■□□□□ 0.04
DDX39A-208ENST00000588692 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.31■□□□□ 0.042e-6■■■■■ 32.7
DDX39A-208ENST00000588692 FAM49BQ9NUQ9 324 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 ZSCAN32Q9NX65 697 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 ARMCX3Q9UH62 379 aaPredicted RBP15.31■□□□□ 0.04
DDX39A-208ENST00000588692 MAN1B1Q9UKM7 699 aa15.31■□□□□ 0.04
DDX39A-208ENST00000588692 TRIM49BA6NDI0 452 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 TRDMT1O14717 391 aaKnown RBP15.3■□□□□ 0.04
DDX39A-208ENST00000588692 GADD45BO75293 160 aaPredicted RBP15.3■□□□□ 0.04
DDX39A-208ENST00000588692 ABL1P00519 1130 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 LMNAP02545 664 aaKnown RBP15.3■□□□□ 0.04
DDX39A-208ENST00000588692 ARSAP15289 507 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 CD58P19256 250 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 TUBP50607 506 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 SNX30Q5VWJ9 437 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 C12orf29Q8N999 325 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 ZBTB44Q8NCP5 570 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 ZMIZ2Q8NF64 920 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 SEMA4DQ92854 862 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 TWNKQ96RR1 684 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 SMOQ99835 787 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 ECT2Q9H8V3 914 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 PNPLA8Q9NP80 782 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 CHMP5Q9NZZ3 219 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 COQ4Q9Y3A0 265 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 WNT6Q9Y6F9 365 aa15.3■□□□□ 0.04
DDX39A-208ENST00000588692 RIF1Q5UIP0 2472 aaKnown RBP15.29■□□□□ 0.04
DDX39A-208ENST00000588692 BICDL2A1A5D9 508 aa15.29■□□□□ 0.04
DDX39A-208ENST00000588692 OTOL1A6NHN0 477 aaPredicted RBP15.29■□□□□ 0.04
DDX39A-208ENST00000588692 LEFTY2O00292 366 aa15.29■□□□□ 0.04
DDX39A-208ENST00000588692 PAPSS2O95340 614 aaPredicted RBP15.29■□□□□ 0.04
DDX39A-208ENST00000588692 NFATC1O95644 943 aa15.29■□□□□ 0.04
DDX39A-208ENST00000588692 NRLP54845 237 aa15.29■□□□□ 0.04
DDX39A-208ENST00000588692 GRSF1Q12849 480 aaKnown RBP eCLIP15.29■□□□□ 0.04
DDX39A-208ENST00000588692 NR1H3Q13133 447 aa15.29■□□□□ 0.04
DDX39A-208ENST00000588692 MORC3Q14149 939 aa15.29■□□□□ 0.04
DDX39A-208ENST00000588692 EML3Q32P44 896 aa15.29■□□□□ 0.04
DDX39A-208ENST00000588692 TMEM196Q5HYL7 178 aa15.29■□□□□ 0.04
DDX39A-208ENST00000588692 TTC16Q8NEE8 873 aa15.29■□□□□ 0.04
DDX39A-208ENST00000588692 SCAMP5Q8TAC9 235 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms