RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 KDSRQ06136 332 aa14.6□□□□□ -0.07
HDAC5-208ENST00000588419 TAF10Q12962 218 aa14.6□□□□□ -0.07
HDAC5-208ENST00000588419 PSMD6Q15008 389 aa14.6□□□□□ -0.07
HDAC5-208ENST00000588419 PLK5Q496M5 336 aa14.6□□□□□ -0.07
HDAC5-208ENST00000588419 TDRD10Q5VZ19 366 aaKnown RBP14.6□□□□□ -0.07
HDAC5-208ENST00000588419 ANO7Q6IWH7 933 aa14.6□□□□□ -0.07
HDAC5-208ENST00000588419 UNC13DQ70J99 1090 aa14.6□□□□□ -0.07
HDAC5-208ENST00000588419 EPM2AIP1Q7L775 607 aaPredicted RBP14.6□□□□□ -0.07
HDAC5-208ENST00000588419 ZNF507Q8TCN5 953 aa14.6□□□□□ -0.07
HDAC5-208ENST00000588419 SLITRK1Q96PX8 696 aa14.6□□□□□ -0.07
HDAC5-208ENST00000588419 DUSP15Q9H1R2 295 aaPredicted RBP14.6□□□□□ -0.07
HDAC5-208ENST00000588419 SMYD3Q9H7B4 428 aa14.6□□□□□ -0.07
HDAC5-208ENST00000588419 CFAP97Q9P2B7 532 aa14.6□□□□□ -0.07
HDAC5-208ENST00000588419 EXOC3O60645 756 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 AKAP3O75969 853 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 KRT37O76014 449 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 RHOBTB1O94844 696 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 YEATS4O95619 227 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 OPRD1P41143 372 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 STPG1Q5TH74 334 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 RNF43Q68DV7 783 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 LIMS2Q7Z4I7 341 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 GRAMD1CQ8IYS0 662 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 B3GALNT2Q8NCR0 500 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 SCFD1Q8WVM8 642 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 DDX1Q92499 740 aaKnown RBP14.59□□□□□ -0.07
HDAC5-208ENST00000588419 FBXO32Q969P5 355 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 C7orf25Q9BPX7 421 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 EDEM2Q9BV94 578 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 ELOVL4Q9GZR5 314 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 RNF38Q9H0F5 515 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 ZDHHC4Q9NPG8 344 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 TMEM30AQ9NV96 361 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 FAM13BQ9NYF5 915 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 ATP8B3O60423 1300 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 CACNA1BQ00975 2339 aa14.59□□□□□ -0.07
HDAC5-208ENST00000588419 PLXND1Q9Y4D7 1925 aa14.58□□□□□ -0.07
HDAC5-208ENST00000588419 ZNF840PA6NDX5 716 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 TACC1O75410 805 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 IRF1P10914 325 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 TCF3P15923 654 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 TIE1P35590 1138 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 SLC6A11P48066 632 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 ME1P48163 572 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 CUL4BQ13620 913 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 ZNF699Q32M78 642 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 SFTPA1Q8IWL2 248 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 USP33Q8TEY7 942 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 ZNF516Q92618 1163 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 SYAP1Q96A49 352 aaPredicted RBP14.58□□□□□ -0.08
HDAC5-208ENST00000588419 C8orf48Q96LL4 319 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 TTLL2Q9BWV7 592 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 B3GNT5Q9BYG0 378 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 MAGEF1Q9HAY2 307 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 VPS45Q9NRW7 570 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 PCDHGA5Q9Y5G8 931 aa14.58□□□□□ -0.08
HDAC5-208ENST00000588419 K7EQS6 105 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 KLF8O95600 359 aaPredicted RBP14.57□□□□□ -0.08
HDAC5-208ENST00000588419 CAVIN2O95810 425 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 OAS1P00973 400 aaKnown RBP14.57□□□□□ -0.08
HDAC5-208ENST00000588419 APODP05090 189 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 PFKLP17858 780 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 YWHAQP27348 245 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 PPP3CCP48454 512 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 LIMK1P53667 647 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 CDH8P55286 799 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 NOP14P78316 857 aaKnown RBP14.57□□□□□ -0.08
HDAC5-208ENST00000588419 SLC7A9P82251 487 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 ORC1Q13415 861 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 DHCR24Q15392 516 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 ST3GAL2Q16842 350 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 USP39Q53GS9 565 aaKnown RBP14.57□□□□□ -0.08
HDAC5-208ENST00000588419 ZNF667Q5HYK9 610 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 PLA2G2CQ5R387 149 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 ARMCX6Q7L4S7 300 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 FAM35AQ86V20 835 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 C12orf40Q86WS4 652 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 CEP57L1Q8IYX8 460 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 NUP93Q8N1F7 819 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 ALLCQ8N6M5 410 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 SPRYD3Q8NCJ5 442 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 CCDC26Q8TAB7 109 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 ZC3H10Q96K80 434 aaKnown RBP14.57□□□□□ -0.08
HDAC5-208ENST00000588419 CEP295NLQ96MC4 621 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 NACA2Q9H009 215 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.57□□□□□ -0.083e-10■■■■■ 130.4
HDAC5-208ENST00000588419 BCCIPQ9P287 314 aaKnown RBP eCLIP14.57□□□□□ -0.08
HDAC5-208ENST00000588419 SH3BP1Q9Y3L3 701 aa14.57□□□□□ -0.08
HDAC5-208ENST00000588419 CNOT1A5YKK6 2376 aaKnown RBP14.56□□□□□ -0.08
HDAC5-208ENST00000588419 TPRP12270 2363 aaKnown RBP14.56□□□□□ -0.08
HDAC5-208ENST00000588419 PI4KAP42356 2102 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 SLC9A3R1O14745 358 aaPredicted RBP14.56□□□□□ -0.08
HDAC5-208ENST00000588419 RTN3O95197 1032 aaPredicted RBP14.56□□□□□ -0.08
HDAC5-208ENST00000588419 ADH1CP00326 375 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 ADH5P11766 374 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 BCKDHBP21953 392 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 DHPSP49366 369 aaPredicted RBP14.56□□□□□ -0.08
HDAC5-208ENST00000588419 KNOP1Q1ED39 458 aaKnown RBP14.56□□□□□ -0.08
HDAC5-208ENST00000588419 GAB4Q2WGN9 574 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 N4BP2L1Q5TBK1 243 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms