RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 DGKKQ5KSL6 1271 aa20.74■□□□□ 0.91
TPM4-208ENST00000588410 PAQR9Q6ZVX9 377 aa20.74■□□□□ 0.91
TPM4-208ENST00000588410 MAML2Q8IZL2 1156 aaPredicted RBP20.74■□□□□ 0.91
TPM4-208ENST00000588410 CPA6Q8N4T0 437 aa20.74■□□□□ 0.91
TPM4-208ENST00000588410 SEMA4AQ9H3S1 761 aa20.74■□□□□ 0.91
TPM4-208ENST00000588410 ARMCX3Q9UH62 379 aaPredicted RBP20.74■□□□□ 0.91
TPM4-208ENST00000588410 PRR23AA6NEV1 266 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 ARSAP15289 507 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 ADORA2BP29275 332 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 SLC5A3P53794 718 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 USP4Q13107 963 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 TXNDC11Q6PKC3 985 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 ASCL5Q7RTU5 278 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 ZC3H3Q8IXZ2 948 aaKnown RBP20.73■□□□□ 0.91
TPM4-208ENST00000588410 TTC39CQ8N584 583 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 C12orf29Q8N999 325 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 OSCP1Q8WVF1 389 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 OVCA2Q8WZ82 227 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 SEMA4DQ92854 862 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 HPS4Q9NQG7 708 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 COMMD8Q9NX08 183 aa20.73■□□□□ 0.91
TPM4-208ENST00000588410 FAM200BP0CF97 657 aa20.72■□□□□ 0.91
TPM4-208ENST00000588410 MAP3K7CLP57077 242 aa20.72■□□□□ 0.91
TPM4-208ENST00000588410 KLHL10Q6JEL2 608 aa20.72■□□□□ 0.91
TPM4-208ENST00000588410 RIN3Q8TB24 985 aa20.72■□□□□ 0.91
TPM4-208ENST00000588410 ATP2A3Q93084 1043 aa20.72■□□□□ 0.91
TPM4-208ENST00000588410 EXOC4Q96A65 974 aa20.72■□□□□ 0.91
TPM4-208ENST00000588410 CYFIP2Q96F07 1278 aa20.72■□□□□ 0.91
TPM4-208ENST00000588410 FAXDC2Q96IV6 333 aa20.72■□□□□ 0.91
TPM4-208ENST00000588410 TWNKQ96RR1 684 aa20.72■□□□□ 0.91
TPM4-208ENST00000588410 SMOQ99835 787 aa20.72■□□□□ 0.91
TPM4-208ENST00000588410 METTL14Q9HCE5 456 aaKnown RBP20.72■□□□□ 0.91
TPM4-208ENST00000588410 RBM12Q9NTZ6 932 aaKnown RBP20.72■□□□□ 0.91
TPM4-208ENST00000588410 WNT6Q9Y6F9 365 aa20.72■□□□□ 0.91
TPM4-208ENST00000588410 CACNA1HO95180 2353 aa20.72■□□□□ 0.91
TPM4-208ENST00000588410 BICDL2A1A5D9 508 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 BIN1O00499 593 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 CILPO75339 1184 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 TCF3P15923 654 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 ANP32AP39687 249 aaKnown RBP20.71■□□□□ 0.91
TPM4-208ENST00000588410 CCR3P51677 355 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 UBE2HP62256 183 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 SLC7A9P82251 487 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 GRSF1Q12849 480 aaKnown RBP eCLIP20.71■□□□□ 0.91
TPM4-208ENST00000588410 NR1H3Q13133 447 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 CCDC40Q4G0X9 1142 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 SCAMP5Q8TAC9 235 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 ATRIPQ8WXE1 791 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 CEP63Q96MT8 703 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 HNRNPABQ99729 332 aaKnown RBP20.71■□□□□ 0.91
TPM4-208ENST00000588410 FBXO44Q9H4M3 255 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 PRMT8Q9NR22 394 aaPredicted RBP20.71■□□□□ 0.91
TPM4-208ENST00000588410 SMPD4Q9NXE4 827 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 CHORDC1Q9UHD1 332 aaPredicted RBP20.71■□□□□ 0.91
TPM4-208ENST00000588410 CPQQ9Y646 472 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 PIEZO1Q92508 2521 aa20.71■□□□□ 0.91
TPM4-208ENST00000588410 LEFTY2O00292 366 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 TNFRSF10BO14763 440 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 OAS1P00973 400 aaKnown RBP20.7■□□□□ 0.9
TPM4-208ENST00000588410 LMNAP02545 664 aaKnown RBP20.7■□□□□ 0.9
TPM4-208ENST00000588410 MBL2P11226 248 aaPredicted RBP20.7■□□□□ 0.9
TPM4-208ENST00000588410 CD44P16070 742 aaKnown RBP20.7■□□□□ 0.9
TPM4-208ENST00000588410 CXCL12P48061 93 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 MORC3Q14149 939 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 ZNF394Q53GI3 561 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 HECTD3Q5T447 861 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 TSSK4Q6SA08 328 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 MAMSTRQ6ZN01 415 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 FILIP1Q7Z7B0 1213 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 SYNPOQ8N3V7 929 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 SPEM1Q8N4L4 309 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 NELFBQ8WX92 580 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 HEXIM2Q96MH2 286 aaKnown RBP20.7■□□□□ 0.9
TPM4-208ENST00000588410 NACA2Q9H009 215 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 RNF38Q9H0F5 515 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 ECT2Q9H8V3 914 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 CSNK1G1Q9HCP0 422 aa20.7■□□□□ 0.9
TPM4-208ENST00000588410 OTOL1A6NHN0 477 aaPredicted RBP20.69■□□□□ 0.9
TPM4-208ENST00000588410 BEST1O76090 585 aa20.69■□□□□ 0.9
TPM4-208ENST00000588410 CBWD6Q4V339 395 aa20.69■□□□□ 0.9
TPM4-208ENST00000588410 CBWD3Q5JTY5 395 aa20.69■□□□□ 0.9
TPM4-208ENST00000588410 CBWD5Q5RIA9 395 aa20.69■□□□□ 0.9
TPM4-208ENST00000588410 DDX42Q86XP3 938 aaKnown RBP eCLIP20.69■□□□□ 0.99e-6■□□□□ 9.6
TPM4-208ENST00000588410 ZMIZ2Q8NF64 920 aa20.69■□□□□ 0.9
TPM4-208ENST00000588410 WHAMMQ8TF30 809 aa20.69■□□□□ 0.9
TPM4-208ENST00000588410 JAKMIP2Q96AA8 810 aa20.69■□□□□ 0.9
TPM4-208ENST00000588410 FAM126AQ9BYI3 521 aaPredicted RBP20.69■□□□□ 0.9
TPM4-208ENST00000588410 CISHQ9NSE2 258 aa20.69■□□□□ 0.9
TPM4-208ENST00000588410 ZSCAN32Q9NX65 697 aa20.69■□□□□ 0.9
TPM4-208ENST00000588410 IL37Q9NZH6 218 aa20.69■□□□□ 0.9
TPM4-208ENST00000588410 GMIPQ9P107 970 aa20.69■□□□□ 0.9
TPM4-208ENST00000588410 CTNND2Q9UQB3 1225 aa20.69■□□□□ 0.9
TPM4-208ENST00000588410 PCDHGA2Q9Y5H1 932 aa20.69■□□□□ 0.9
TPM4-208ENST00000588410 PPP1R3GB7ZBB8 358 aa20.68■□□□□ 0.9
TPM4-208ENST00000588410 NFATC1O95644 943 aa20.68■□□□□ 0.9
TPM4-208ENST00000588410 OLFM2O95897 454 aa20.68■□□□□ 0.9
TPM4-208ENST00000588410 NRLP54845 237 aa20.68■□□□□ 0.9
TPM4-208ENST00000588410 EML3Q32P44 896 aa20.68■□□□□ 0.9
TPM4-208ENST00000588410 Q6ZS52 159 aa20.68■□□□□ 0.9
TPM4-208ENST00000588410 CLEC20AQ6ZU45 233 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms