RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 CLDN5O00501 218 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 DYNC1I1O14576 645 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 PAPSS1O43252 624 aaPredicted RBP11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 TADA3O75528 432 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 ZRANB2O95218 330 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 KRT7P08729 469 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 ACRP10323 421 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 LCP1P13796 627 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 PDGFRAP16234 1089 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 TKTP29401 623 aaKnown RBP11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 SSR1P43307 286 aaKnown RBP11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 DNA2P51530 1060 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 ZNF143P52747 638 aaPredicted RBP11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 MAP3K7CLP57077 242 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 BTG3Q14201 252 aaPredicted RBP11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 USP41Q3LFD5 358 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 ODF2Q5BJF6 829 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 LLGL2Q6P1M3 1020 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 KCNT2Q6UVM3 1135 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 VSTM1Q6UX27 236 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 CLEC20AQ6ZU45 233 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 FAM183BPQ6ZVS7 135 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 SLC26A9Q7LBE3 791 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 CEP57Q86XR8 500 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 RCOR2Q8IZ40 523 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 SIX6OS1Q8N1H7 587 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 SCML4Q8N228 414 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 SPATA4Q8NEY3 305 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 C2orf15Q8WU43 125 aaKnown RBP11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 MYLPFQ96A32 169 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 PKMYT1Q99640 499 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 SMOQ99835 787 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 TTPALQ9BTX7 342 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 TRIM62Q9BVG3 475 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 GPR62Q9BZJ7 368 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 MTIF3Q9H2K0 278 aaKnown RBP11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 DMAP1Q9NPF5 467 aaPredicted RBP11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 CNGB3Q9NQW8 809 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 KRT82Q9NSB4 513 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 TMEM51Q9NW97 253 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 MARCH5Q9NX47 278 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 USTQ9Y2C2 406 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 PCDHB5Q9Y5E4 795 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 TET1Q8NFU7 2136 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 C2CD4BA6NLJ0 364 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 F8W810 466 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 CCDC188H7C350 402 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 DPYSL4O14531 572 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 HSF2BPO75031 334 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 BDNFP23560 247 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 SDC4P31431 198 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 PCK1P35558 622 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 MAGEA11P43364 429 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 RNASE9P60153 205 aaKnown RBP11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 COPS2P61201 443 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 MRPS5P82675 430 aaKnown RBP11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 PTPROQ16827 1216 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 LONRF2Q1L5Z9 754 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 GLE1Q53GS7 698 aaKnown RBP11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 KIAA1841Q6NSI8 718 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 PSRC1Q6PGN9 363 aaPredicted RBP11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 OLFML1Q6UWY5 402 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 ZNF365Q70YC5 407 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 RSRC2Q7L4I2 434 aaKnown RBP11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 POLNQ7Z5Q5 900 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 LRRTM3Q86VH5 581 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 GPR65Q8IYL9 337 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 KATNAL2Q8IYT4 538 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 MMGT1Q8N4V1 131 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 OR10T2Q8NGX3 314 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 EXD1Q8NHP7 514 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 JOSD2Q8TAC2 188 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 PHOSPHO2Q8TCD6 241 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 SPPL2BQ8TCT7 592 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 RXFP2Q8WXD0 754 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 IRGQQ8WZA9 623 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 BADQ92934 168 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 TMEM169Q96HH4 297 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 IGSF21Q96ID5 467 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 RBM41Q96IZ5 413 aaKnown RBP11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 YME1L1Q96TA2 773 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 DDX23Q9BUQ8 820 aaKnown RBP11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 TRIM7Q9C029 511 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 RRN3Q9NYV6 651 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 SPG21Q9NZD8 308 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 TJP2Q9UDY2 1190 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 MTUS1Q9ULD2 1270 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 BACE2Q9Y5Z0 518 aa11.02□□□□□ -0.65
CHMP1B-202ENST00000588284 GOLGA6L10A0A0M3HER8 536 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 ZBBXA8MT70 800 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 NT5C1B-RDH14C9J2C7 533 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 F8VP50 259 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 PDE2AO00408 941 aaPredicted RBP11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 TRIM66O15016 1216 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 BEST1O76090 585 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 GJB6O95452 261 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 NOS2P35228 1153 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 PPM1AP35813 382 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 GRIK1P39086 918 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms