RNA–Protein interactions for RNA: ENST00000587995.5

CACNA2D4-222, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

TSL 5 BASIC

Gene CACNA2D4, Length 3,883 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-222	ENST00000587995	KIZ	Q2M2Z5	673 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	DCAF6	Q58WW2	860 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	MFSD5	Q6N075	450 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	PIGW	Q7Z7B1	504 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	ALLC	Q8N6M5	410 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	NAF1	Q96HR8	494 aa	Known RBP	10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	MECR	Q9BV79	373 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	WWP1	Q9H0M0	922 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	MAP3K20	Q9NYL2	800 aa	Known RBP	10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	MYH7B	A7E2Y1	1941 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	FAM155B	O75949	473 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	CETP	P11597	493 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	IREB2	P48200	963 aa	Known RBP	10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	AQP5	P55064	265 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	PTPN20	Q4JDL3	420 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	C16orf46	Q6P387	395 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	OTOA	Q7RTW8	1153 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	POU5F2	Q8N7G0	328 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	C12orf29	Q8N999	325 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	TTC8	Q8TAM2	541 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	RAB3IL1	Q8TBN0	382 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	PIP4K2C	Q8TBX8	421 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	USP33	Q8TEY7	942 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	TFAP2B	Q92481	460 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	MTBP	Q96DY7	904 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	SLC24A2	Q9UI40	661 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	TSPAN16	Q9UKR8	245 aa		10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	GOLGB1	Q14789	3259 aa	Known RBP	10.2	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	NFIC	P08651	508 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	ZCCHC18	P0CG32	403 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	RARB	P10826	455 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	KCNA2	P16389	499 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	STIP1	P31948	543 aa	Known RBP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	ABCG1	P45844	678 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	RPL10A	P62906	217 aa	Known RBP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	TNFAIP2	Q03169	654 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	IL31	Q6EBC2	164 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	ISLR2	Q6UXK2	745 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	RNF135	Q8IUD6	432 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	EXOC8	Q8IYI6	725 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	TMEM176A	Q96HP8	235 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	SMARCAD1	Q9H4L7	1026 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	GLI3	P10071	1580 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	FAM237B	A0A1B0GVD1	139 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	KLRG2	A4D1S0	409 aa	Predicted RBP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	C5orf60	A6NFR6	353 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	LACTBL1	A8MY62	500 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	MICAL2	O94851	1124 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	SLC4A1	P02730	911 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	HMGCR	P04035	888 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	SERPINB4	P48594	390 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	HADHB	P55084	474 aa	Known RBP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	TGFB2	P61812	414 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	KLC1	Q07866	573 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	CUL3	Q13618	768 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	DPYSL3	Q14195	570 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	RASA2	Q15283	850 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	LACTB2	Q53H82	288 aa	Predicted RBP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	PHF13	Q86YI8	300 aa	Predicted RBP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	TRIM4	Q9C037	500 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	NDE1	Q9NXR1	346 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	ARHGAP28	Q9P2N2	729 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	ANGPTL2	Q9UKU9	493 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	COQ4	Q9Y3A0	265 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	MYH4	Q9Y623	1939 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995		A0A0B4J269	797 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	VNN1	O95497	513 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	ASS1	P00966	412 aa	Known RBP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	GDF10	P55107	478 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	HSDL1	Q3SXM5	330 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	MMEL1	Q495T6	779 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	TWF2	Q6IBS0	349 aa	Known RBP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	PLEKHA7	Q6IQ23	1121 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	ABHD15	Q6UXT9	468 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	CDKL3	Q8IVW4	592 aa	Predicted RBP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	SRPK1	Q96SB4	655 aa	Known RBP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	CPXM1	Q96SM3	734 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	UNK	Q9C0B0	810 aa	Known RBP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	MTO1	Q9Y2Z2	717 aa	Known RBP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	PTPRJ	Q12913	1337 aa		10.19	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	STRCP1	A6NGW2	1772 aa		10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	FCHO1	O14526	889 aa		10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	HUS1	O60921	280 aa		10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	GPC4	O75487	556 aa		10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	DGKI	O75912	1065 aa		10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	LSM8	O95777	96 aa	Known RBP	10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	PTPN4	P29074	926 aa		10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	CYP1B1	Q16678	543 aa		10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	TTC39B	Q5VTQ0	682 aa	Predicted RBP	10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	JADE1	Q6IE81	842 aa		10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	PDZD4	Q76G19	769 aa	Predicted RBP	10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	RYBP	Q8N488	228 aa	Predicted RBP	10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	EXT2	Q93063	718 aa		10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	CNPY3	Q9BT09	278 aa		10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	DPP3	Q9NY33	737 aa		10.18	□□□□□ -0.78
CACNA2D4-222	ENST00000587995	SYNPO2	Q9UMS6	1093 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms