RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 UBXN6Q9BZV1 441 aa13.84□□□□□ -0.19
DNMT1-205ENST00000585920 PDCL3Q9H2J4 239 aa13.84□□□□□ -0.19
DNMT1-205ENST00000585920 CSNK1G1Q9HCP0 422 aa13.84□□□□□ -0.19
DNMT1-205ENST00000585920 WDR6Q9NNW5 1121 aaKnown RBP13.84□□□□□ -0.19
DNMT1-205ENST00000585920 ACP6Q9NPH0 428 aa13.84□□□□□ -0.19
DNMT1-205ENST00000585920 TMEM30AQ9NV96 361 aa13.84□□□□□ -0.19
DNMT1-205ENST00000585920 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.84□□□□□ -0.19
DNMT1-205ENST00000585920 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.84□□□□□ -0.191e-10■■■■■ 32.9
DNMT1-205ENST00000585920 PLXNA3P51805 1871 aa13.84□□□□□ -0.19
DNMT1-205ENST00000585920 FGF19O95750 216 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 CCDC172P0C7W6 258 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 CYP11B1P15538 503 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 FSHRP23945 695 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 BCAT1P54687 386 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 PDE4CQ08493 712 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 BST2Q10589 180 aaKnown RBP13.83□□□□□ -0.2
DNMT1-205ENST00000585920 MTMR3Q13615 1198 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 SMAD2Q15796 467 aaKnown RBP13.83□□□□□ -0.2
DNMT1-205ENST00000585920 SPECC1LQ69YQ0 1117 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 TTC30AQ86WT1 665 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 FMNL3Q8IVF7 1028 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 STKLD1Q8NE28 680 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 ZMIZ2Q8NF64 920 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 ASB2Q96Q27 587 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 ZSWIM1Q9BR11 485 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 POMKQ9H5K3 350 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 UXTQ9UBK9 157 aaPredicted RBP13.83□□□□□ -0.2
DNMT1-205ENST00000585920 MYO6Q9UM54 1294 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 MRPS23Q9Y3D9 190 aaKnown RBP13.83□□□□□ -0.2
DNMT1-205ENST00000585920 ITIH6Q6UXX5 1313 aa13.83□□□□□ -0.2
DNMT1-205ENST00000585920 M0QYV0 167 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 XPO1O14980 1071 aaKnown RBP13.82□□□□□ -0.2
DNMT1-205ENST00000585920 AP5Z1O43299 807 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 RTN3O95197 1032 aaPredicted RBP13.82□□□□□ -0.2
DNMT1-205ENST00000585920 SETSIPP0DME0 302 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 FERP16591 822 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 HMGA1P17096 107 aaKnown RBP13.82□□□□□ -0.2
DNMT1-205ENST00000585920 YWHAQP27348 245 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 PDE6CP51160 858 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 KCNQ1P51787 676 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 ARID5AQ03989 594 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 PIGZQ86VD9 579 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 VSTM4Q8IW00 320 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 SECISBP2LQ93073 1101 aaKnown RBP13.82□□□□□ -0.2
DNMT1-205ENST00000585920 MYRFLQ96LU7 910 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 GCNAQ96QF7 691 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 LRRC3Q9BY71 257 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 ZMYND15Q9H091 742 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 ZNF334Q9HCZ1 680 aaPredicted RBP13.82□□□□□ -0.2
DNMT1-205ENST00000585920 PNPLA8Q9NP80 782 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 AVENQ9NQS1 362 aaPredicted RBP13.82□□□□□ -0.2
DNMT1-205ENST00000585920 COMMD8Q9NX08 183 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 CLUHO75153 1309 aa13.82□□□□□ -0.2
DNMT1-205ENST00000585920 A0A1W2PQJ5 194 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 RCCD1A6NED2 376 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 LRRC53A6NM62 1247 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 TNFRSF10BO14763 440 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 TPM1P09493 284 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 IL9P15248 144 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 GABRR2P28476 465 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 CDC25CP30307 473 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 ZNF75DP51815 510 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 SLC5A3P53794 718 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 EPHA5P54756 1037 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 IFRD2Q12894 506 aaPredicted RBP13.81□□□□□ -0.2
DNMT1-205ENST00000585920 MEA1Q16626 185 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 PKDCCQ504Y2 493 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 SFMBT2Q5VUG0 894 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 TAF3Q5VWG9 929 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 DENND1BQ6P3S1 775 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 TMC8Q8IU68 726 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 ITFG1Q8TB96 612 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 BAP1Q92560 729 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 TRMT2BQ96GJ1 504 aaKnown RBP13.81□□□□□ -0.2
DNMT1-205ENST00000585920 PHF7Q9BWX1 381 aaPredicted RBP13.81□□□□□ -0.2
DNMT1-205ENST00000585920 TTYH3Q9C0H2 523 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 NUCKS1Q9H1E3 243 aaKnown RBP13.81□□□□□ -0.2
DNMT1-205ENST00000585920 ATXN3LQ9H3M9 355 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 FBXO44Q9H4M3 255 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 LRRC4Q9HBW1 653 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.81□□□□□ -0.2
DNMT1-205ENST00000585920 CAPN11Q9UMQ6 739 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 PCDHGC3Q9UN70 934 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 LUC7L2Q9Y383 392 aaKnown RBP13.81□□□□□ -0.2
DNMT1-205ENST00000585920 CEP83Q9Y592 693 aa13.81□□□□□ -0.2
DNMT1-205ENST00000585920 A0A1W2PRU2 124 aa13.8□□□□□ -0.2
DNMT1-205ENST00000585920 HHLA1C9JL84 531 aa13.8□□□□□ -0.2
DNMT1-205ENST00000585920 TULP2O00295 520 aa13.8□□□□□ -0.2
DNMT1-205ENST00000585920 CFHP08603 1231 aa13.8□□□□□ -0.2
DNMT1-205ENST00000585920 GJA1P17302 382 aa13.8□□□□□ -0.2
DNMT1-205ENST00000585920 GBP2P32456 591 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-205ENST00000585920 CCR2P41597 374 aa13.8□□□□□ -0.2
DNMT1-205ENST00000585920 GPD2P43304 727 aa13.8□□□□□ -0.2
DNMT1-205ENST00000585920 PLA2G4AP47712 749 aa13.8□□□□□ -0.2
DNMT1-205ENST00000585920 USP46P62068 366 aa13.8□□□□□ -0.2
DNMT1-205ENST00000585920 ZBED6P86452 979 aa13.8□□□□□ -0.2
DNMT1-205ENST00000585920 TAF10Q12962 218 aa13.8□□□□□ -0.2
DNMT1-205ENST00000585920 TRIM14Q14142 442 aa13.8□□□□□ -0.2
DNMT1-205ENST00000585920 ASIC2Q16515 512 aa13.8□□□□□ -0.2
DNMT1-205ENST00000585920 SLC5A9Q2M3M2 681 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms