RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 GATA6Q92908 595 aa8.5□□□□□ -1.05
SUPT4H1-207ENST00000581540 LENG1Q96BZ8 264 aaPredicted RBP8.5□□□□□ -1.05
SUPT4H1-207ENST00000581540 TOE1Q96GM8 510 aaKnown RBP8.5□□□□□ -1.05
SUPT4H1-207ENST00000581540 DYDC2Q96IM9 177 aa8.5□□□□□ -1.05
SUPT4H1-207ENST00000581540 FEM1CQ96JP0 617 aa8.5□□□□□ -1.05
SUPT4H1-207ENST00000581540 C1orf43Q9BWL3 253 aa8.5□□□□□ -1.05
SUPT4H1-207ENST00000581540 BTBD2Q9BX70 525 aa8.5□□□□□ -1.05
SUPT4H1-207ENST00000581540 AMNQ9BXJ7 453 aa8.5□□□□□ -1.05
SUPT4H1-207ENST00000581540 PCDHAC1Q9H158 963 aa8.5□□□□□ -1.05
SUPT4H1-207ENST00000581540 SEMA3GQ9NS98 782 aa8.5□□□□□ -1.05
SUPT4H1-207ENST00000581540 ATP8A2Q9NTI2 1148 aa8.5□□□□□ -1.05
SUPT4H1-207ENST00000581540 NXF1Q9UBU9 619 aaKnown RBP8.5□□□□□ -1.05
SUPT4H1-207ENST00000581540 A0A1W2PR48 441 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 MYO1CO00159 1063 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 CNPP09543 421 aaKnown RBP8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 GYS1P13807 737 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 PSMA3P25788 255 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 PSMA4P25789 261 aaKnown RBP8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 RFC4P35249 363 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 MMP14P50281 582 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 BCAT1P54687 386 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 SNX16P57768 344 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 CTXN1P60606 82 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 NSUN2Q08J23 767 aaKnown RBP eCLIP8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 CHAF1BQ13112 559 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 SCARB2Q14108 478 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 C19orf54Q5BKX5 351 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 SNX30Q5VWJ9 437 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 CEP128Q6ZU80 1094 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 SMIM5Q71RC9 77 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 GALNTL5Q7Z4T8 443 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 PRPF39Q86UA1 669 aaKnown RBP8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 CLEC10AQ8IUN9 316 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 DCBLD1Q8N8Z6 715 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 CFHR4Q92496 578 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 SPSB4Q96A44 273 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 REEP2Q9BRK0 252 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 ABHD16BQ9H3Z7 469 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 ABCF3Q9NUQ8 709 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 POLR3BQ9NW08 1133 aaPredicted RBP8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 TMOD3Q9NYL9 352 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 MID2Q9UJV3 735 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 RPS6KA6Q9UK32 745 aa8.49□□□□□ -1.05
SUPT4H1-207ENST00000581540 INSRP06213 1382 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 hCG_1807616A0A1W2PRN6 198 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 GNB5O14775 395 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 FOXN1O15353 648 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 DHX15O43143 795 aaKnown RBP8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 MATN4O95460 622 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 AMY1AP04745 511 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 GNAI2P04899 355 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 CD1AP06126 327 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 IL11P20809 199 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 ABCD3P28288 659 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 MLH1P40692 756 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 KCNC1P48547 511 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 RGS19P49795 217 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 MVKQ03426 396 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 ITPK1Q13572 414 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 SLC5A9Q2M3M2 681 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 BICRALQ6AI39 1079 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 LRSAM1Q6UWE0 723 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 KIAA0408Q6ZU52 694 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 CPLX4Q7Z7G2 160 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 ARMC10Q8N2F6 343 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 NUP43Q8NFH3 380 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 OR7D4Q8NG98 312 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 OR56A3Q8NH54 315 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 SMCR8Q8TEV9 937 aaPredicted RBP8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 PEX11GQ96HA9 241 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 G6PC3Q9BUM1 346 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 SEZ6LQ9BYH1 1024 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 CD248Q9HCU0 757 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 SLC39A2Q9NP94 309 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 LPAR3Q9UBY5 353 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 DERAQ9Y315 318 aa8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 DICER1Q9UPY3 1922 aaKnown RBP8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 COL5A3P25940 1745 aaPredicted RBP8.48□□□□□ -1.05
SUPT4H1-207ENST00000581540 TIAM2Q8IVF5 1701 aa8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 A0A087WZ62 844 aa8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 A0A0A6YYK5 440 aaPredicted RBP8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 KIAA0355O15063 1070 aa8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 TEX33O43247 280 aa8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 COBLO75128 1261 aa8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 USP2O75604 605 aaPredicted RBP8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 RPS6KA4O75676 772 aa8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 LY86O95711 162 aa8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 ENO2P09104 434 aaPredicted RBP8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 ATP6V1B1P15313 513 aa8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 HOXB4P17483 251 aaPredicted RBP8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 TGM1P22735 817 aa8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 PSMC2P35998 433 aaKnown RBP8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 SREBF1P36956 1147 aa8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 ATP8B2P98198 1209 aa8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 SMC1AQ14683 1233 aaKnown RBP8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 CTXN3Q4LDR2 81 aa8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 TMTC4Q5T4D3 741 aa8.47□□□□□ -1.05
SUPT4H1-207ENST00000581540 NUGGCQ68CJ6 796 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms