RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 FAM3CQ92520 227 aa15.74■□□□□ 0.11
SS18-212ENST00000579061 TWNKQ96RR1 684 aa15.74■□□□□ 0.11
SS18-212ENST00000579061 SLC22A12Q96S37 553 aa15.74■□□□□ 0.11
SS18-212ENST00000579061 KCNK16Q96T55 309 aa15.74■□□□□ 0.11
SS18-212ENST00000579061 SMOQ99835 787 aa15.74■□□□□ 0.11
SS18-212ENST00000579061 IER2Q9BTL4 223 aa15.74■□□□□ 0.11
SS18-212ENST00000579061 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.74■□□□□ 0.113e-16■■■■■ 317.3
SS18-212ENST00000579061 GKN1Q9NS71 199 aa15.74■□□□□ 0.11
SS18-212ENST00000579061 KRT82Q9NSB4 513 aa15.74■□□□□ 0.11
SS18-212ENST00000579061 ARHGAP26Q9UNA1 814 aa15.74■□□□□ 0.11
SS18-212ENST00000579061 FANCMQ8IYD8 2048 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 FAM92AA1XBS5 289 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 C2orf78A6NCI8 922 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 OLFM2O95897 454 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 CCDC130P13994 396 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 KPNA1P52294 538 aaPredicted RBP15.73■□□□□ 0.11
SS18-212ENST00000579061 MARSP56192 900 aaKnown RBP15.73■□□□□ 0.11
SS18-212ENST00000579061 SLC7A9P82251 487 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 FZD5Q13467 585 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 ZNF77Q15935 545 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 ITPRIPL2Q3MIP1 535 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 CC2D1AQ6P1N0 951 aaPredicted RBP15.73■□□□□ 0.11
SS18-212ENST00000579061 ARL14EPQ8N8R7 260 aaPredicted RBP15.73■□□□□ 0.11
SS18-212ENST00000579061 C12orf29Q8N999 325 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 ZMIZ2Q8NF64 920 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 CYFIP2Q96F07 1278 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 ZFYVE19Q96K21 471 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 CYP2S1Q96SQ9 504 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 GTSE1Q9NYZ3 720 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 CTNND2Q9UQB3 1225 aa15.73■□□□□ 0.11
SS18-212ENST00000579061 PROB1E7EW31 1015 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 SPECC1L-ADORA2AF8WAN1 911 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 P4HA2O15460 535 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 FGFR1OPO95684 399 aaKnown RBP15.72■□□□□ 0.11
SS18-212ENST00000579061 OAS1P00973 400 aaKnown RBP15.72■□□□□ 0.11
SS18-212ENST00000579061 FAM200BP0CF97 657 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 CD58P19256 250 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 CTHP32929 405 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 NBL1P41271 181 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 FMO5P49326 533 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 SLC5A3P53794 718 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 YWHAEP62258 255 aaKnown RBP15.72■□□□□ 0.11
SS18-212ENST00000579061 ORC1Q13415 861 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 RUNX3Q13761 415 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 MTF1Q14872 753 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 PDGFRLQ15198 375 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 CAMK4Q16566 473 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 SNX30Q5VWJ9 437 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 MAMSTRQ6ZN01 415 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 TATDN2Q93075 761 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 FBXO32Q969P5 355 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 FBXO44Q9H4M3 255 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 PNPLA8Q9NP80 782 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 CISHQ9NSE2 258 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 FAM49BQ9NUQ9 324 aa15.72■□□□□ 0.11
SS18-212ENST00000579061 ZDHHC11BP0C7U3 371 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 ADORA2BP29275 332 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 TUBP50607 506 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 TNK2Q07912 1038 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 CETN1Q12798 172 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 CLEC20AQ6ZU45 233 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 RIN3Q8TB24 985 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 OSCP1Q8WVF1 389 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 TMEM176AQ96HP8 235 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 CHRDQ9H2X0 955 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 CLSTN2Q9H4D0 955 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 HPS4Q9NQG7 708 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 FAM86C1Q9NVL1 165 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 FBXO4Q9UKT5 387 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 NDRG2Q9UN36 371 aaKnown RBP15.71■□□□□ 0.11
SS18-212ENST00000579061 MYO16Q9Y6X6 1858 aa15.71■□□□□ 0.11
SS18-212ENST00000579061 BEST1O76090 585 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 CHRNB1P11230 501 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 TBXAS1P24557 533 aaPredicted RBP15.7■□□□□ 0.1
SS18-212ENST00000579061 MRE11P49959 708 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 RAD23BP54727 409 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 STX17P56962 302 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 MAP3K7CLP57077 242 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 AMPD2Q01433 879 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 IFRD2Q12894 506 aaPredicted RBP15.7■□□□□ 0.1
SS18-212ENST00000579061 CUL2Q13617 745 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 LRRC32Q14392 662 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 DGKKQ5KSL6 1271 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 PPP1R26Q5T8A7 1209 aaPredicted RBP15.7■□□□□ 0.1
SS18-212ENST00000579061 DDX42Q86XP3 938 aaKnown RBP eCLIP15.7■□□□□ 0.1
SS18-212ENST00000579061 TRIM59Q8IWR1 403 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 MLKLQ8NB16 471 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 SLC4A11Q8NBS3 891 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 SCAMP5Q8TAC9 235 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 SH3RF2Q8TEC5 729 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 HEXIM2Q96MH2 286 aaKnown RBP15.7■□□□□ 0.1
SS18-212ENST00000579061 SRRTQ9BXP5 876 aaKnown RBP15.7■□□□□ 0.1
SS18-212ENST00000579061 DUSP16Q9BY84 665 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 RNF38Q9H0F5 515 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 LMAN1LQ9HAT1 526 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 SPATA6Q9NWH7 488 aaPredicted RBP15.7■□□□□ 0.1
SS18-212ENST00000579061 DUS2Q9NX74 493 aaKnown RBP15.7■□□□□ 0.1
SS18-212ENST00000579061 RWDD2AQ9UIY3 292 aa15.7■□□□□ 0.1
SS18-212ENST00000579061 HHLA1C9JL84 531 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 LEFTY2O00292 366 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms