RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 TOE1Q96GM8 510 aaKnown RBP11.94□□□□□ -0.5
GGA3-206ENST00000578773 NACC1Q96RE7 527 aa11.94□□□□□ -0.5
GGA3-206ENST00000578773 LGMNQ99538 433 aa11.94□□□□□ -0.5
GGA3-206ENST00000578773 TRIM9Q9C026 710 aa11.94□□□□□ -0.5
GGA3-206ENST00000578773 HSPBP1Q9NZL4 362 aa11.94□□□□□ -0.5
GGA3-206ENST00000578773 EIF2B4Q9UI10 523 aaKnown RBP11.94□□□□□ -0.5
GGA3-206ENST00000578773 PHLPP2Q6ZVD8 1323 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 WASH3PC4AMC7 463 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 H0Y8X5 98 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 BCAT2O15382 392 aaPredicted RBP11.93□□□□□ -0.5
GGA3-206ENST00000578773 PRPF40AO75400 957 aaKnown RBP11.93□□□□□ -0.5
GGA3-206ENST00000578773 NOL4O94818 638 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 GCFC2P16383 781 aaKnown RBP11.93□□□□□ -0.5
GGA3-206ENST00000578773 CYP2F1P24903 491 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 GRIA2P42262 883 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 TNFRSF4P43489 277 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 C6orf132Q5T0Z8 1188 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 MPZL3Q6UWV2 235 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 GATAD2AQ86YP4 633 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 EXD3Q8N9H8 876 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 SPPL2BQ8TCT7 592 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 MRGPRX1Q96LB2 322 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 NRSN2Q9GZP1 204 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 TTC12Q9H892 705 aaPredicted RBP11.93□□□□□ -0.5
GGA3-206ENST00000578773 SMPD4Q9NXE4 827 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 FTSJ1Q9UET6 329 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 ARHGAP26Q9UNA1 814 aa11.93□□□□□ -0.5
GGA3-206ENST00000578773 TTC26A0AVF1 554 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 LACTBL1A8MY62 500 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 HCRTO43612 131 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 ZNF217O75362 1048 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 CYP11A1P05108 521 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 CSH1P0DML2 217 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 CSH2P0DML3 217 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 ADH5P11766 374 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 TCF3P15923 654 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 CD6P30203 668 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 TXKP42681 527 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 GRK6P43250 576 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 EFNA5P52803 228 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 PEX3P56589 373 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 TMPRSS3P57727 454 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 SF3A1Q15459 793 aaKnown RBP11.92□□□□□ -0.5
GGA3-206ENST00000578773 ECM1Q16610 540 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 LY6G5CQ5SRR4 150 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 C10orf76Q5T2E6 689 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 WSCD1Q658N2 575 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 FBXL19Q6PCT2 694 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 ETFBKMTQ8IXQ9 262 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 SLFN12Q8IYM2 578 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 DAW1Q8N136 415 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 TCHPQ9BT92 498 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 MRPL4Q9BYD3 311 aaKnown RBP11.92□□□□□ -0.5
GGA3-206ENST00000578773 RNF38Q9H0F5 515 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 WSB2Q9NYS7 404 aaPredicted RBP11.92□□□□□ -0.5
GGA3-206ENST00000578773 PCDHA12Q9UN75 941 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 PAXBP1Q9Y5B6 917 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 C2CD3Q4AC94 2353 aa11.92□□□□□ -0.5
GGA3-206ENST00000578773 NBASA2RRP1 2371 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 ITPR3Q14573 2671 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 ARHGEF35A5YM69 484 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 TBC1D3BA6NDS4 549 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 CCDC169A6NNP5 214 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 ENC1O14682 589 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 TRAK2O60296 914 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 HDCP19113 662 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 PDIA3P30101 505 aaKnown RBP11.91□□□□□ -0.5
GGA3-206ENST00000578773 NTSR1P30989 418 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 HNF1BP35680 557 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 EIF2DP41214 584 aaKnown RBP11.91□□□□□ -0.5
GGA3-206ENST00000578773 NPTX2P47972 431 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 KCNB1Q14721 858 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 PPP2R5AQ15172 486 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 PRAMEF14Q5SWL7 426 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 APBB1IPQ7Z5R6 666 aaPredicted RBP11.91□□□□□ -0.5
GGA3-206ENST00000578773 CACUL1Q86Y37 369 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 FOXJ1Q92949 421 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 WBP2Q969T9 261 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 TRMT2BQ96GJ1 504 aaKnown RBP11.91□□□□□ -0.5
GGA3-206ENST00000578773 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
GGA3-206ENST00000578773 TMEM60Q9H2L4 133 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 PCDHB5Q9Y5E4 795 aa11.91□□□□□ -0.5
GGA3-206ENST00000578773 DOCK9Q9BZ29 2069 aa11.9□□□□□ -0.5
GGA3-206ENST00000578773 SPTBN1Q01082 2364 aaKnown RBP11.9□□□□□ -0.5
GGA3-206ENST00000578773 TULP3O75386 442 aa11.9□□□□□ -0.5
GGA3-206ENST00000578773 RFPL3O75679 317 aa11.9□□□□□ -0.5
GGA3-206ENST00000578773 BAG4O95429 457 aaKnown RBP11.9□□□□□ -0.5
GGA3-206ENST00000578773 XRCC6P12956 609 aaKnown RBP eCLIP11.9□□□□□ -0.5
GGA3-206ENST00000578773 ACADVLP49748 655 aa11.9□□□□□ -0.5
GGA3-206ENST00000578773 USP46P62068 366 aa11.9□□□□□ -0.5
GGA3-206ENST00000578773 SSRP1Q08945 709 aaKnown RBP11.9□□□□□ -0.5
GGA3-206ENST00000578773 NR5A1Q13285 461 aa11.9□□□□□ -0.5
GGA3-206ENST00000578773 NOLC1Q14978 699 aaKnown RBP eCLIP11.9□□□□□ -0.5
GGA3-206ENST00000578773 CALCRLQ16602 461 aa11.9□□□□□ -0.5
GGA3-206ENST00000578773 C4orf17Q53FE4 359 aa11.9□□□□□ -0.5
GGA3-206ENST00000578773 C9orf57Q5W0N0 161 aa11.9□□□□□ -0.5
GGA3-206ENST00000578773 SCARA3Q6AZY7 606 aa11.9□□□□□ -0.5
GGA3-206ENST00000578773 IFT74Q96LB3 600 aa11.9□□□□□ -0.5
GGA3-206ENST00000578773 MYRFLQ96LU7 910 aa11.9□□□□□ -0.5
GGA3-206ENST00000578773 SPENQ96T58 3664 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms