RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 CDH9Q9ULB4 789 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 SART1O43290 800 aaKnown RBP17.8■□□□□ 0.44
SREBF1-218ENST00000578469 HCRTO43612 131 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 RNF8O76064 485 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 MYOGP15173 224 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 GPD1P21695 349 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 SLC7A5Q01650 507 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 SLC6A3Q01959 620 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 OGDHQ02218 1023 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 ZNF252P-AS1Q0IIN9 211 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 TIGD5Q53EQ6 642 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 PMF1Q6P1K2 205 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 CCNI2Q6ZMN8 369 aaPredicted RBP17.8■□□□□ 0.44
SREBF1-218ENST00000578469 FAM183BPQ6ZVS7 135 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 CCDC50Q8IVM0 306 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 ABI1Q8IZP0 508 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 C3orf58Q8NDZ4 430 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 DBF4BQ8NFT6 615 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 LINC01599Q8WXQ3 324 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 SLC9A7Q96T83 725 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 NCAPGQ9BPX3 1015 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 SYT15Q9BQS2 421 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 DDX47Q9H0S4 455 aaKnown RBP17.8■□□□□ 0.44
SREBF1-218ENST00000578469 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.8■□□□□ 0.44
SREBF1-218ENST00000578469 PCDHB7Q9Y5E2 793 aa17.8■□□□□ 0.44
SREBF1-218ENST00000578469 F8VP50 259 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 ENPP3O14638 875 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 FSCN2O14926 492 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 XPO1O14980 1071 aaKnown RBP17.79■□□□□ 0.44
SREBF1-218ENST00000578469 RAD51CO43502 376 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 NBNO60934 754 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 PHF2O75151 1096 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 HEXIM1O94992 359 aaKnown RBP17.79■□□□□ 0.44
SREBF1-218ENST00000578469 CYP11A1P05108 521 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 CA3P07451 260 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 KRT7P08729 469 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 ACAT1P24752 427 aaKnown RBP17.79■□□□□ 0.44
SREBF1-218ENST00000578469 CHRNA3P32297 505 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 RFC2P35250 354 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 GJC1P36383 396 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 SCNN1AP37088 669 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 TFF2Q03403 129 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 RNASELQ05823 741 aaKnown RBP17.79■□□□□ 0.44
SREBF1-218ENST00000578469 SMC1AQ14683 1233 aaKnown RBP17.79■□□□□ 0.44
SREBF1-218ENST00000578469 MDH1BQ5I0G3 518 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 AADACL2Q6P093 401 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 ADAT2Q7Z6V5 191 aaKnown RBP17.79■□□□□ 0.44
SREBF1-218ENST00000578469 DEFB128Q7Z7B8 93 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 THEM5Q8N1Q8 247 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 RSPH1Q8WYR4 309 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 LPIN3Q9BQK8 851 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 PAAF1Q9BRP4 392 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 CNPY3Q9BT09 278 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 DUSP16Q9BY84 665 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 DMGDHQ9UI17 866 aaKnown RBP17.79■□□□□ 0.44
SREBF1-218ENST00000578469 LRFN2Q9ULH4 789 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 TRANK1O15050 2925 aa17.79■□□□□ 0.44
SREBF1-218ENST00000578469 M0QZQ0 153 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 HOXA2O43364 376 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 KRT1P04264 644 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 BMP1P13497 986 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 TYMPP19971 482 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 TNFRSF8P28908 595 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 PLA2G4AP47712 749 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 RPL34P49207 117 aaKnown RBP17.78■□□□□ 0.44
SREBF1-218ENST00000578469 ZNF143P52747 638 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-218ENST00000578469 COPS2P61201 443 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 PLCB3Q01970 1234 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 DHX34Q14147 1143 aaKnown RBP17.78■□□□□ 0.44
SREBF1-218ENST00000578469 CLLU1OSQ5K130 101 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 POLNQ7Z5Q5 900 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 FUKQ8N0W3 1084 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 EMC1Q8N766 993 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 HDAC7Q8WUI4 952 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 MAGOHBQ96A72 148 aaKnown RBP17.78■□□□□ 0.44
SREBF1-218ENST00000578469 SUSD3Q96L08 255 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 NECAB3Q96P71 396 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-218ENST00000578469 HOMER3Q9NSC5 361 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 HCN4Q9Y3Q4 1203 aa17.78■□□□□ 0.44
SREBF1-218ENST00000578469 TIMM13Q9Y5L4 95 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-218ENST00000578469 TCF20Q9UGU0 1960 aaKnown RBP17.78■□□□□ 0.44
SREBF1-218ENST00000578469 PRRC2BQ5JSZ5 2229 aaKnown RBP17.78■□□□□ 0.44
SREBF1-218ENST00000578469 FAM187AA6NFU0 413 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 TULP2O00295 520 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 PIK3R2O00459 728 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 ATP2C2O75185 946 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 ZMYND10O75800 440 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 FAM200BP0CF97 657 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 PDGFRAP16234 1089 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 NPR3P17342 541 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 IGFBP6P24592 240 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-218ENST00000578469 BRCC3P46736 316 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 MRPS25P82663 173 aaKnown RBP17.77■□□□□ 0.44
SREBF1-218ENST00000578469 GUCY2DQ02846 1103 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 DAB2IPQ5VWQ8 1189 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 OLFML1Q6UWY5 402 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 MYCBPAPQ8TBZ2 947 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 PHOSPHO2Q8TCD6 241 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 RXFP2Q8WXD0 754 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 ACBD6Q9BR61 282 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms