RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 ACADSBP45954 432 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 NOMO3P69849 1222 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 DUSP4Q13115 394 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 SLC18A3Q16572 532 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 DUSP6Q16828 381 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 CCDC142Q17RM4 750 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 HABP4Q5JVS0 413 aaKnown RBP11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 DENND1BQ6P3S1 775 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 CLEC20AQ6ZU45 233 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 TTC30AQ86WT1 665 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 LRRC8AQ8IWT6 810 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 ATAD1Q8NBU5 361 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 SPATA17Q96L03 361 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 GAS2L1Q99501 681 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 CHP1Q99653 195 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 SEPT5Q99719 369 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 CYP4F11Q9HBI6 524 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 LUC7LQ9NQ29 371 aaKnown RBP11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 EHD2Q9NZN4 543 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 PCDHGC5Q9Y5F6 944 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 LAMA3Q16787 3333 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 DDX3XO00571 662 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 ARHGAP6O43182 974 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 NCK2O43639 380 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 VNN2O95498 520 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 PLEKP08567 350 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 HOXA9P31269 272 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 GRIK1P39086 918 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 GPD2P43304 727 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 NSFP46459 744 aaKnown RBP11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 PLA2G4AP47712 749 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 ALDH1A3P47895 512 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 NRIP1P48552 1158 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 KIF11P52732 1056 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 MAP3K7CLP57077 242 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 CENPCQ03188 943 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 PDE4CQ08493 712 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 GRIN2CQ14957 1233 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 VEPH1Q14D04 833 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 CLEC16AQ2KHT3 1053 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 ASTE1Q2TB18 679 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 MGAT5BQ3V5L5 792 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 C10orf76Q5T2E6 689 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 PASD1Q8IV76 773 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 SCN4BQ8IWT1 228 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 KREMEN2Q8NCW0 462 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 SLC30A5Q8TAD4 765 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 IPO4Q8TEX9 1081 aaKnown RBP11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 SLC22A17Q8WUG5 538 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 SLC35F5Q8WV83 523 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 KCTD13Q8WZ19 329 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 SECISBP2LQ93073 1101 aaKnown RBP11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 TRIM11Q96F44 468 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 HSFY1Q96LI6 401 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 SMOQ99835 787 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 DZANK1Q9NVP4 752 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 COMMD8Q9NX08 183 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 ADAMTS1Q9UHI8 967 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 YIPF1Q9Y548 306 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 ASB3Q9Y575 518 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 INSL5Q9Y5Q6 135 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 MYO9BQ13459 2157 aa11.81□□□□□ -0.52
TRAPPC8-204ENST00000578252 A0A087X0T9 212 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 EIF3CLB5ME19 914 aaKnown RBP11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 F8VP50 259 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 RTN2O75298 545 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 RTN3O95197 1032 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 SEC24AO95486 1093 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 CALB1P05937 261 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 C8AP07357 584 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 POU2F2P09086 479 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 HNRNPA1P09651 372 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 FAM228BP0C875 321 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 UNGP13051 313 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 EPHB3P54753 998 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 PDCLQ13371 301 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 NAA35Q5VZE5 725 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 ACAD10Q6JQN1 1059 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 RBM23Q86U06 439 aaKnown RBP11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 ITIH5Q86UX2 942 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 TMEM139Q8IV31 216 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 TXLNBQ8N3L3 684 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 EFHBQ8N7U6 833 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 C1orf131Q8NDD1 294 aaKnown RBP11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 OLIG1Q8TAK6 271 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 SLC7A14Q8TBB6 771 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 UBA3Q8TBC4 463 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 CASP10Q92851 521 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 VCPIP1Q96JH7 1222 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 EIF3CQ99613 913 aaKnown RBP11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 RHOBTB2Q9BYZ6 727 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 LRRC4Q9HBW1 653 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 MAN1C1Q9NR34 630 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 ZDHHC7Q9NXF8 308 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 NAGPAQ9UK23 515 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 STRIP2Q9ULQ0 834 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 SLC27A5Q9Y2P5 690 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 HCFC2Q9Y5Z7 792 aa11.8□□□□□ -0.52
TRAPPC8-204ENST00000578252 SART1O43290 800 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms