RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SMNDC1O75940 238 aaKnown RBP eCLIP13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 SERPINE1P05121 402 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 KRT8P05787 483 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 RPL5P46777 297 aaKnown RBP13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 ACVR2BQ13705 512 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 PTK2BQ14289 1009 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 PDK3Q15120 406 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 SEL1L3Q68CR1 1132 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 HHIPL2Q6UWX4 724 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 DHDDSQ86SQ9 333 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 EZH1Q92800 747 aaPredicted RBP13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 ZCWPW1Q9H0M4 648 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 IL1RL2Q9HB29 575 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 ARL8BQ9NVJ2 186 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 SCHIP1Q9P0W5 487 aaPredicted RBP13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 FESP07332 822 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 GARTP22102 1010 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 SLC25A3Q00325 362 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 EMC2Q15006 297 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 ASTE1Q2TB18 679 aaPredicted RBP13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 ZMYM2Q9UBW7 1377 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 TRPC5OSA6NMA1 111 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 SPDYE16A6NNV3 312 aaPredicted RBP13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 APOA4P06727 396 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 GYS1P13807 737 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 PHKA2P46019 1235 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 NCKAP1LP55160 1127 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 GCNT1Q02742 428 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 SPDYE2Q495Y8 402 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 N4BP2L1Q5TBK1 243 aaPredicted RBP13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 PLEKHA7Q6IQ23 1121 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 ZNF555Q8NEP9 628 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 ASAP3Q8TDY4 903 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 USP13Q92995 863 aaPredicted RBP13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 DCUN1D5Q9BTE7 237 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 ZNF518BQ9C0D4 1074 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 ARHGAP23Q9P227 1491 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 EML1O00423 815 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 KRT75O95678 551 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 ALBP02768 609 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 ETS1P14921 441 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 SERPINB1P30740 379 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 SOX11P35716 441 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 GADL1Q6ZQY3 521 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 SP8Q8IXZ3 490 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 RMND5BQ96G75 393 aaPredicted RBP13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 TCF7L2Q9NQB0 619 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 CSADQ9Y600 493 aa13.59□□□□□ -0.23
PCDHGB3-201ENST00000576222 SDR42E2A6NKP2 422 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 GJB6O95452 261 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 LCP1P13796 627 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 ABCE1P61221 599 aaKnown RBP13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 DAB2P98082 770 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 PRKCEQ02156 737 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 ITGA9Q13797 1035 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 STILQ15468 1287 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 KBTBD12Q3ZCT8 623 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 TMTC4Q5T4D3 741 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 ZFP1Q6P2D0 407 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 CCNJLQ8IV13 435 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 UBA3Q8TBC4 463 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 RNF217Q8TC41 542 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 PTPRN2Q92932 1015 aa13.58□□□□□ -0.23
PCDHGB3-201ENST00000576222 DCXO43602 365 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 HMOX2P30519 316 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 ATICP31939 592 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 DLG4P78352 724 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 INTS5Q6P9B9 1019 aaKnown RBP13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 PATL1Q86TB9 770 aaKnown RBP13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 SKA2Q8WVK7 121 aaPredicted RBP13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 SORCS3Q9UPU3 1222 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 CACNA1FO60840 1977 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 DLG5Q8TDM6 1919 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 A0A1W2PPM1 405 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 C3orf70A6NLC5 250 aaPredicted RBP13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 FOXO6A8MYZ6 492 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 TPBGLP0DKB5 382 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 NSUN2Q08J23 767 aaKnown RBP eCLIP13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 KCTD21Q4G0X4 260 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 RC3H1Q5TC82 1133 aaKnown RBP13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 TSHZ1Q6ZSZ6 1077 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 FGFBP2Q9BYJ0 223 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 MAGEB5Q9BZ81 275 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 FRMPD4Q14CM0 1322 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 ECE2O60344 883 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 SNX2O60749 519 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 CREB1P16220 341 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 ECM1Q16610 540 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 CLVS1Q8IUQ0 354 aaPredicted RBP13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 CCDC33Q8N5R6 958 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 EMC1Q8N766 993 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 RNF148Q8N7C7 305 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 DACH2Q96NX9 599 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 NAT9Q9BTE0 207 aa13.58□□□□□ -0.24
PCDHGB3-201ENST00000576222 ZNF189O75820 626 aaPredicted RBP13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 MAPTP10636 758 aaKnown RBP13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 FDFT1P37268 417 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 BST1Q10588 318 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 PDK1Q15118 436 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 OTOP1Q7RTM1 612 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms