RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 CLSTN2Q9H4D0 955 aa17.12■□□□□ 0.33
NDE1-205ENST00000572756 CISHQ9NSE2 258 aa17.12■□□□□ 0.33
NDE1-205ENST00000572756 TRPM5Q9NZQ8 1165 aa17.12■□□□□ 0.33
NDE1-205ENST00000572756 MRPS17Q9Y2R5 130 aaKnown RBP17.12■□□□□ 0.33
NDE1-205ENST00000572756 OLFM2O95897 454 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 YWHAQP27348 245 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 SLC5A3P53794 718 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 MARSP56192 900 aaKnown RBP17.11■□□□□ 0.33
NDE1-205ENST00000572756 TNK2Q07912 1038 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 CCDC40Q4G0X9 1142 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 WDR44Q5JSH3 913 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 TRIM59Q8IWR1 403 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 TTC39CQ8N584 583 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 SCAMP5Q8TAC9 235 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 OVCA2Q8WZ82 227 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 MED15Q96RN5 788 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 PHOX2BQ99453 314 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 C8orf33Q9H7E9 229 aaPredicted RBP17.11■□□□□ 0.33
NDE1-205ENST00000572756 HPS4Q9NQG7 708 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 GKN1Q9NS71 199 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 THG1LQ9NWX6 298 aaKnown RBP17.11■□□□□ 0.33
NDE1-205ENST00000572756 COMMD8Q9NX08 183 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 GTSE1Q9NYZ3 720 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 ARHGAP26Q9UNA1 814 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 MYO15AQ9UKN7 3530 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 VPS13AQ96RL7 3174 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 FANCMQ8IYD8 2048 aa17.11■□□□□ 0.33
NDE1-205ENST00000572756 HHLA1C9JL84 531 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 OAS1P00973 400 aaKnown RBP17.1■□□□□ 0.33
NDE1-205ENST00000572756 CKMP06732 381 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 FAM200BP0CF97 657 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 HDCP19113 662 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
NDE1-205ENST00000572756 MAGEA9P43362 315 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 RPS9P46781 194 aaKnown RBP17.1■□□□□ 0.33
NDE1-205ENST00000572756 SOX9P48436 509 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 PDE6CP51160 858 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 RAD23BP54727 409 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 ZXDBP98169 803 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 ANGPT1Q15389 498 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 SNX30Q5VWJ9 437 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 CLEC20AQ6ZU45 233 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 SLC4A11Q8NBS3 891 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 FAM3CQ92520 227 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 CYFIP2Q96F07 1278 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 SLITRK1Q96PX8 696 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 RNF38Q9H0F5 515 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 LMBRD1Q9NUN5 540 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 FAM86C1Q9NVL1 165 aa17.1■□□□□ 0.33
NDE1-205ENST00000572756 DMDP11532 3685 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 SPECC1L-ADORA2AF8WAN1 911 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 GNA14O95837 355 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 ZDHHC11BP0C7U3 371 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 TRIM21P19474 475 aaKnown RBP17.09■□□□□ 0.33
NDE1-205ENST00000572756 ADORA2BP29275 332 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 CTHP32929 405 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 MAP3K7CLP57077 242 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 SLC7A9P82251 487 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 CUL2Q13617 745 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 MTF1Q14872 753 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 ZNF394Q53GI3 561 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 PPP1R26Q5T8A7 1209 aaPredicted RBP17.09■□□□□ 0.33
NDE1-205ENST00000572756 C1orf228Q6PIY5 440 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 TXNDC11Q6PKC3 985 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 RALGPS2Q86X27 583 aaPredicted RBP17.09■□□□□ 0.33
NDE1-205ENST00000572756 C1orf210Q8IVY1 113 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 UBR7Q8N806 425 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 PDZD8Q8NEN9 1154 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 LMO3Q8TAP4 145 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 ATOH1Q92858 354 aaPredicted RBP17.09■□□□□ 0.33
NDE1-205ENST00000572756 FBXO32Q969P5 355 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 SRRTQ9BXP5 876 aaKnown RBP17.09■□□□□ 0.33
NDE1-205ENST00000572756 PNPLA8Q9NP80 782 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 RWDD2AQ9UIY3 292 aa17.09■□□□□ 0.33
NDE1-205ENST00000572756 NDRG2Q9UN36 371 aaKnown RBP17.09■□□□□ 0.33
NDE1-205ENST00000572756 OTOL1A6NHN0 477 aaPredicted RBP17.08■□□□□ 0.32
NDE1-205ENST00000572756 NCAM2O15394 837 aa17.08■□□□□ 0.32
NDE1-205ENST00000572756 P4HA2O15460 535 aa17.08■□□□□ 0.32
NDE1-205ENST00000572756 KPNA1P52294 538 aaPredicted RBP17.08■□□□□ 0.32
NDE1-205ENST00000572756 IFRD2Q12894 506 aaPredicted RBP17.08■□□□□ 0.32
NDE1-205ENST00000572756 ITPRIPL2Q3MIP1 535 aa17.08■□□□□ 0.32
NDE1-205ENST00000572756 TRIM68Q6AZZ1 485 aa17.08■□□□□ 0.32
NDE1-205ENST00000572756 GPRIN1Q7Z2K8 1008 aa17.08■□□□□ 0.32
NDE1-205ENST00000572756 MAML2Q8IZL2 1156 aaPredicted RBP17.08■□□□□ 0.32
NDE1-205ENST00000572756 TTC8Q8TAM2 541 aa17.08■□□□□ 0.32
NDE1-205ENST00000572756 SH3RF2Q8TEC5 729 aa17.08■□□□□ 0.32
NDE1-205ENST00000572756 CHFRQ96EP1 664 aa17.08■□□□□ 0.32
NDE1-205ENST00000572756 TMEM176AQ96HP8 235 aa17.08■□□□□ 0.32
NDE1-205ENST00000572756 EBF3Q9H4W6 596 aa17.08■□□□□ 0.32
NDE1-205ENST00000572756 USP34Q70CQ2 3546 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 CHRNB1P11230 501 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 ARSAP15289 507 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 NBL1P41271 181 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 TUBP50607 506 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 KCNH2Q12809 1159 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 RUNX3Q13761 415 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 PDGFRLQ15198 375 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 ARHGAP17Q68EM7 881 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 KIAA1958Q8N8K9 716 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 MLKLQ8NB16 471 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms