RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 ADGRG2Q8IZP9 1017 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 PGBD3Q8N328 593 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 KBTBD7Q8WVZ9 684 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 SPATA17Q96L03 361 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 GTPBP2Q9BX10 602 aaKnown RBP21.22■□□□□ 0.99
CCDC40-206ENST00000572083 STRA6Q9BX79 667 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 RNF38Q9H0F5 515 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 PDE11AQ9HCR9 933 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 EXOC7Q9UPT5 735 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 ADAM23O75077 832 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 ABL1P00519 1130 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 TMEM191BP0C7N4 346 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 ANXA13P27216 316 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 GJB2P29033 226 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 SLC7A9P82251 487 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 RBP5P82980 135 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 CYP27A1Q02318 531 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 SEMA3BQ13214 749 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 EOGTQ5NDL2 527 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 VSTM1Q6UX27 236 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 ACCSQ96QU6 501 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 ARHGEF4Q9NR80 690 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 CFAP97Q9P2B7 532 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 PILRBQ9UKJ0 227 aa21.21■□□□□ 0.99
CCDC40-206ENST00000572083 GCNT3O95395 438 aa21.2■□□□□ 0.98
CCDC40-206ENST00000572083 PFKLP17858 780 aa21.2■□□□□ 0.98
CCDC40-206ENST00000572083 EIF2DP41214 584 aaKnown RBP21.2■□□□□ 0.98
CCDC40-206ENST00000572083 KIR2DL1P43626 348 aaPredicted RBP21.2■□□□□ 0.98
CCDC40-206ENST00000572083 CASP5P51878 434 aa21.2■□□□□ 0.98
CCDC40-206ENST00000572083 ATXN3P54252 364 aaPredicted RBP21.2■□□□□ 0.98
CCDC40-206ENST00000572083 HSF5Q4G112 596 aaPredicted RBP21.2■□□□□ 0.98
CCDC40-206ENST00000572083 PEAR1Q5VY43 1037 aaPredicted RBP21.2■□□□□ 0.98
CCDC40-206ENST00000572083 RHBDF2Q6PJF5 856 aa21.2■□□□□ 0.98
CCDC40-206ENST00000572083 DEFB119Q8N690 84 aa21.2■□□□□ 0.98
CCDC40-206ENST00000572083 CBWD1Q9BRT8 395 aa21.2■□□□□ 0.98
CCDC40-206ENST00000572083 TTLL2Q9BWV7 592 aa21.2■□□□□ 0.98
CCDC40-206ENST00000572083 PCIF1Q9H4Z3 704 aa21.2■□□□□ 0.98
CCDC40-206ENST00000572083 CDH9Q9ULB4 789 aa21.2■□□□□ 0.98
CCDC40-206ENST00000572083 CELSR3Q9NYQ7 3312 aa21.2■□□□□ 0.98
CCDC40-206ENST00000572083 PI4KAP42356 2102 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 GON4LQ3T8J9 2241 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 ZNF840PA6NDX5 716 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 SLC9A3R1O14745 358 aaPredicted RBP21.19■□□□□ 0.98
CCDC40-206ENST00000572083 ADH1CP00326 375 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 LDHAP00338 332 aaKnown RBP21.19■□□□□ 0.98
CCDC40-206ENST00000572083 PDGFRBP09619 1106 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 ADH5P11766 374 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 FAM193AP78312 1265 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 MYO1EQ12965 1108 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 HDDC3Q8N4P3 179 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 PCED1BQ96HM7 432 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 ANKRD36BP1Q96IX9 119 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 SEL1LQ9UBV2 794 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 PTPRJQ12913 1337 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 MYOFQ9NZM1 2061 aa21.19■□□□□ 0.98
CCDC40-206ENST00000572083 F8VP50 259 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 OLFM2O95897 454 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 OAS1P00973 400 aaKnown RBP21.18■□□□□ 0.98
CCDC40-206ENST00000572083 GARTP22102 1010 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 GRIA2P42262 883 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 DPP6P42658 865 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 RPL6Q02878 288 aaKnown RBP21.18■□□□□ 0.98
CCDC40-206ENST00000572083 IFRD2Q12894 506 aaPredicted RBP21.18■□□□□ 0.98
CCDC40-206ENST00000572083 BYSLQ13895 437 aaKnown RBP21.18■□□□□ 0.98
CCDC40-206ENST00000572083 SPDYCQ5MJ68 293 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 USP49Q70CQ1 688 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 SYCP3Q8IZU3 236 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 CHCHD4Q8N4Q1 142 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 OR5B17Q8NGF7 314 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 OR2I1PQ8NGU4 316 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 HPDLQ96IR7 371 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 EPSTI1Q96J88 318 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 FGFBP2Q9BYJ0 223 aa21.18■□□□□ 0.98
CCDC40-206ENST00000572083 R3HCC1Q9Y3T6 440 aaKnown RBP21.18■□□□□ 0.98
CCDC40-206ENST00000572083 PCDH15Q96QU1 1955 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 PCNX2A6NKB5 2137 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 UPK3BL1B0FP48 263 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 UPK3BL2E5RIL1 263 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 TRIM66O15016 1216 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 AP5Z1O43299 807 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 MBL2P11226 248 aaPredicted RBP21.17■□□□□ 0.98
CCDC40-206ENST00000572083 HOXD12P35452 270 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 GFPT1Q06210 699 aaPredicted RBP21.17■□□□□ 0.98
CCDC40-206ENST00000572083 SF3A1Q15459 793 aaKnown RBP21.17■□□□□ 0.98
CCDC40-206ENST00000572083 MAPRE1Q15691 268 aaKnown RBP21.17■□□□□ 0.98
CCDC40-206ENST00000572083 DUOXA1Q1HG43 343 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 MDH1BQ5I0G3 518 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 DPH6Q7L8W6 267 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 LIMS2Q7Z4I7 341 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 PHTF2Q8N3S3 785 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 DNAJC19Q96DA6 116 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 CEP295NLQ96MC4 621 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 EHD2Q9NZN4 543 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 SLC6A14Q9UN76 642 aa21.17■□□□□ 0.98
CCDC40-206ENST00000572083 CEP192Q8TEP8 1941 aa21.16■□□□□ 0.98
CCDC40-206ENST00000572083 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.16■□□□□ 0.98
CCDC40-206ENST00000572083 TAF4O00268 1085 aa21.16■□□□□ 0.98
CCDC40-206ENST00000572083 OPHN1O60890 802 aa21.16■□□□□ 0.98
CCDC40-206ENST00000572083 BMP15O95972 392 aa21.16■□□□□ 0.98
CCDC40-206ENST00000572083 GAP43P17677 238 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms