RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 NELL2Q99435 816 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 MESP1Q9BRJ9 268 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 FAM167BQ9BTA0 163 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 TTYH3Q9C0H2 523 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 PCDHAC1Q9H158 963 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 HEYLQ9NQ87 328 aaPredicted RBP4.31□□□□□ -1.72
UBR1-211ENST00000569971 XPNPEP3Q9NQH7 507 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 ZSCAN32Q9NX65 697 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 ETAA1Q9NY74 926 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 PLA2G3Q9NZ20 509 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 ZNF69Q9UC07 566 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 PGAP2Q9UHJ9 254 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 ZMYND8Q9ULU4 1186 aaPredicted RBP4.31□□□□□ -1.72
UBR1-211ENST00000569971 CDYLQ9Y232 598 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 SH3BP1Q9Y3L3 701 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 LRRFIP2Q9Y608 721 aaKnown RBP4.31□□□□□ -1.72
UBR1-211ENST00000569971 BCORL1Q5H9F3 1711 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 LAMC1P11047 1609 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 TRPM1Q7Z4N2 1603 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 ATP10AO60312 1499 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 MAGI2Q86UL8 1455 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 RTEL1-TNFRSF6BF6WH68 1400 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 PRAG1Q86YV5 1406 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 KANK1Q14678 1352 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 SPAG9O60271 1321 aaKnown RBP4.3□□□□□ -1.72
UBR1-211ENST00000569971 WDR33Q9C0J8 1336 aaKnown RBP4.3□□□□□ -1.72
UBR1-211ENST00000569971 EIF3FO00303 357 aaPredicted RBP4.3□□□□□ -1.72
UBR1-211ENST00000569971 DCLK1O15075 740 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 MFAP3LO75121 409 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 RAD17O75943 681 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 TPH1P17752 444 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 CHRM3P20309 590 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 ATICP31939 592 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 VIPR2P41587 438 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 PTDSS1P48651 473 aaKnown RBP4.3□□□□□ -1.72
UBR1-211ENST00000569971 CPT1AP50416 773 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 WNT3P56703 355 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 LMOD3Q0VAK6 560 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 KLF10Q13118 480 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 KCNAB1Q14722 419 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 IQCB1Q15051 598 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 ELAVL1Q15717 326 aaKnown RBP4.3□□□□□ -1.72
UBR1-211ENST00000569971 MAPKAPK3Q16644 382 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 TMTC4Q5T4D3 741 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 SULT6B1Q6IMI4 303 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 TCTN3Q6NUS6 607 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 GAS2L3Q86XJ1 694 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 GALNT15Q8N3T1 639 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 MB21D1Q8N884 522 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 MDGA1Q8NFP4 955 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 STT3BQ8TCJ2 826 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 ZNF384Q8TF68 577 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 NUP133Q8WUM0 1156 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 EDAQ92838 391 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 ZSCAN31Q96LW9 406 aaPredicted RBP4.3□□□□□ -1.72
UBR1-211ENST00000569971 MOGAT1Q96PD6 335 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 PPP1R9BQ96SB3 815 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 ADOQ96SZ5 270 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 PRPF18Q99633 342 aaKnown RBP4.3□□□□□ -1.72
UBR1-211ENST00000569971 DHX36Q9H2U1 1008 aaKnown RBP4.3□□□□□ -1.72
UBR1-211ENST00000569971 TMEM8AQ9HCN3 771 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 AURKAIP1Q9NWT8 199 aaPredicted RBP4.3□□□□□ -1.72
UBR1-211ENST00000569971 DKK4Q9UBT3 224 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 CAPN11Q9UMQ6 739 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 CLCA2Q9UQC9 943 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 WDR7Q9Y4E6 1490 aa4.3□□□□□ -1.72
UBR1-211ENST00000569971 DHX29Q7Z478 1369 aaKnown RBP4.29□□□□□ -1.72
UBR1-211ENST00000569971 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 CCDC78A2IDD5 438 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 RRN3P2A6NIE6 340 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 HMGB1P1B2RPK0 211 aaPredicted RBP4.29□□□□□ -1.72
UBR1-211ENST00000569971 PRRT4C9JH25 899 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 NCAM2O15394 837 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 ASNA1O43681 348 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 INMTO95050 263 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 ITGA5P08648 1049 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 IDEP14735 1019 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 GCSHP23434 173 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 LILRA4P59901 499 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 FOXL1Q12952 345 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 INSCQ1MX18 579 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 ZIK1Q3SY52 487 aaPredicted RBP4.29□□□□□ -1.72
UBR1-211ENST00000569971 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.29□□□□□ -1.72
UBR1-211ENST00000569971 JAKMIP3Q5VZ66 844 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 TSHZ3Q63HK5 1081 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 METRNLQ641Q3 311 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 LIN54Q6MZP7 749 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 TAPT1Q6NXT6 567 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 TAF2Q6P1X5 1199 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 RNF207Q6ZRF8 634 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 RFX8Q6ZV50 586 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 MOGAT3Q86VF5 341 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 SGMS1Q86VZ5 419 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 CCDC28AQ8IWP9 274 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 PSD4Q8NDX1 1056 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 OR1N1Q8NGS0 311 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 PPP2R3CQ969Q6 453 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 MPP4Q96JB8 637 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 TRIB1Q96RU8 372 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 SMOQ99835 787 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms