RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 ITGB1P05556 798 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 GPD1P21695 349 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 IGFBP6P24592 240 aaPredicted RBP8.03□□□□□ -1.12
CDH13-214ENST00000569455 RPL34P49207 117 aaKnown RBP8.03□□□□□ -1.12
CDH13-214ENST00000569455 GATMP50440 423 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 RPL7AP62424 266 aaKnown RBP8.03□□□□□ -1.12
CDH13-214ENST00000569455 HTRA4P83105 476 aaPredicted RBP8.03□□□□□ -1.12
CDH13-214ENST00000569455 SLC6A3Q01959 620 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 PPP2R5EQ16537 467 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 HADHQ16836 314 aaKnown RBP8.03□□□□□ -1.12
CDH13-214ENST00000569455 EFHC1Q5JVL4 640 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 LRRC38Q5VT99 294 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 ZNF280DQ6N043 979 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 FAM171BQ6P995 826 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 FAM183BPQ6ZVS7 135 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 RSRC2Q7L4I2 434 aaKnown RBP8.03□□□□□ -1.12
CDH13-214ENST00000569455 FAM35AQ86V20 835 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 PIGZQ86VD9 579 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 HERC6Q8IVU3 1022 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 RASGEF1CQ8N431 466 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 KCTD13Q8WZ19 329 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 CD101Q93033 1021 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 PCED1BQ96HM7 432 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 LPIN3Q9BQK8 851 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 OXCT2Q9BYC2 517 aaPredicted RBP8.03□□□□□ -1.12
CDH13-214ENST00000569455 B3GNT5Q9BYG0 378 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 UBXN6Q9BZV1 441 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 KRT82Q9NSB4 513 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 ASNSD1Q9NWL6 643 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 CXXC1Q9P0U4 656 aaPredicted RBP8.03□□□□□ -1.12
CDH13-214ENST00000569455 TJP2Q9UDY2 1190 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 DNAJB4Q9UDY4 337 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 MSRAQ9UJ68 235 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 TTC7AQ9ULT0 858 aaPredicted RBP8.03□□□□□ -1.12
CDH13-214ENST00000569455 USTQ9Y2C2 406 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 RWDD3Q9Y3V2 267 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 VWA8A3KMH1 1905 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 CHD7Q9P2D1 2997 aa8.03□□□□□ -1.12
CDH13-214ENST00000569455 NLRC5Q86WI3 1866 aa8.02□□□□□ -1.12
CDH13-214ENST00000569455 MUC6Q6W4X9 2439 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 PTPRSQ13332 1948 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 PATJQ8NI35 1801 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 OR6C75A6NL08 312 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 CCDC188H7C350 402 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 PDE2AO00408 941 aaPredicted RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 B4GALT3O60512 393 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 DGKIO75912 1065 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 FBXO21O94952 628 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 UPP2O95045 317 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 GJB6O95452 261 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 TUBBP07437 444 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 GALTP07902 379 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 KRT7P08729 469 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 LCP1P13796 627 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 TKTP29401 623 aaKnown RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 SDC4P31431 198 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 RFC1P35251 1148 aaPredicted RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 SLC11A1P49279 550 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 ALDH7A1P49419 539 aaKnown RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 PEX5P50542 639 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 ZNF143P52747 638 aaPredicted RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 MRPS5P82675 430 aaKnown RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 NFE2Q16621 373 aaPredicted RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 ERCC6LQ2NKX8 1250 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 ODF2Q5BJF6 829 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 FAM171A1Q5VUB5 890 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 KIAA0319Q5VV43 1072 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 CC2D1AQ6P1N0 951 aaPredicted RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 FUT10Q6P4F1 479 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 OLFML1Q6UWY5 402 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.02□□□□□ -1.13
CDH13-214ENST00000569455 CLEC20AQ6ZU45 233 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 ARCQ7LC44 396 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 SPATA2LQ8IUW3 424 aaPredicted RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 CMTR2Q8IYT2 770 aaKnown RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 KATNAL2Q8IYT4 538 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 SIX6OS1Q8N1H7 587 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 MMGT1Q8N4V1 131 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 GPR161Q8N6U8 529 aaKnown RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 LRRN4CLQ8ND94 238 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 SPATA4Q8NEY3 305 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 SP7Q8TDD2 431 aaPredicted RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 MAIP1Q8WWC4 291 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 ALG3Q92685 438 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 KRT35Q92764 455 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 MYLPFQ96A32 169 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 MS4A14Q96JA4 679 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 SAMD11Q96NU1 681 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 RTP3Q9BQQ7 232 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 CNPY3Q9BT09 278 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 LRFN3Q9BTN0 628 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 ZBED2Q9BTP6 218 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 TRIM7Q9C029 511 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 DMAP1Q9NPF5 467 aaPredicted RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 DDX56Q9NY93 547 aaKnown RBP8.02□□□□□ -1.13
CDH13-214ENST00000569455 STK39Q9UEW8 545 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 MYO9BQ13459 2157 aa8.02□□□□□ -1.13
CDH13-214ENST00000569455 GBF1Q92538 1859 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 TULP2O00295 520 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 PIK3R2O00459 728 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms