RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 TMEM184AQ6ZMB5 413 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 C12orf76Q8N812 135 aaPredicted RBP16.94■□□□□ 0.3
USB1-215ENST00000569252 MSANTD4Q8NCY6 345 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 UBA3Q8TBC4 463 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 TFAP2BQ92481 460 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 ATOH1Q92858 354 aaPredicted RBP16.94■□□□□ 0.3
USB1-215ENST00000569252 C8orf48Q96LL4 319 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 SFXN1Q9H9B4 322 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.94■□□□□ 0.3
USB1-215ENST00000569252 ASB3Q9Y575 518 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 INSL5Q9Y5Q6 135 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 RIF1Q5UIP0 2472 aaKnown RBP16.93■□□□□ 0.3
USB1-215ENST00000569252 CCDC195A0A1B0GUA6 201 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 ZMYND10O75800 440 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 ASGR2P07307 311 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 CDR2Q01850 454 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 BST2Q10589 180 aaKnown RBP16.93■□□□□ 0.3
USB1-215ENST00000569252 TBX2Q13207 712 aaPredicted RBP16.93■□□□□ 0.3
USB1-215ENST00000569252 DDR2Q16832 855 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 TDRD12Q587J7 1177 aaKnown RBP16.93■□□□□ 0.3
USB1-215ENST00000569252 TRIM72Q6ZMU5 477 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 IRF2BP2Q7Z5L9 587 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 TMEM35BQ8NCS4 154 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 AGPAT1Q99943 283 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.93■□□□□ 0.3
USB1-215ENST00000569252 UBXN6Q9BZV1 441 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 LHX5Q9H2C1 402 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 DEF6Q9H4E7 631 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 ACP6Q9NPH0 428 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 PCDHGC3Q9UN70 934 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 YIPF1Q9Y548 306 aa16.93■□□□□ 0.3
USB1-215ENST00000569252 C2CD4DB7Z1M9 353 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 F8VP50 259 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 MFAP3LO75121 409 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 CALCAP01258 141 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 CSH1P0DML2 217 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 CSH2P0DML3 217 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 PTPN2P17706 415 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 HOXA9P31269 272 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 MEA1Q16626 185 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 CCDC142Q17RM4 750 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 CYP26C1Q6V0L0 522 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 PAQR9Q6ZVX9 377 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 NOP9Q86U38 636 aaKnown RBP16.92■□□□□ 0.3
USB1-215ENST00000569252 GPIHBP1Q8IV16 184 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 NUP93Q8N1F7 819 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 GIPC2Q8TF65 315 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 SPATA17Q96L03 361 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 KCNK16Q96T55 309 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 RHOBTB2Q9BYZ6 727 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 PRKD2Q9BZL6 878 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 POMKQ9H5K3 350 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 HAUS4Q9H6D7 363 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 SYNCQ9H7C4 482 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 LRRC4Q9HBW1 653 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 ABHD10Q9NUJ1 306 aa16.92■□□□□ 0.3
USB1-215ENST00000569252 TSC2P49815 1807 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 XPO1O14980 1071 aaKnown RBP16.91■□□□□ 0.3
USB1-215ENST00000569252 CCL16O15467 120 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 NRDCO43847 1150 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 SOAT2O75908 522 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 RTN3O95197 1032 aaPredicted RBP16.91■□□□□ 0.3
USB1-215ENST00000569252 MMEP08473 750 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 SKILP12757 684 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 GSDMDP57764 484 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 ATAT1Q5SQI0 421 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 CYP4A22Q5TCH4 519 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 PPP1R2P3Q6NXS1 205 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 CLEC20AQ6ZU45 233 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 DENND5BQ6ZUT9 1274 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 ASCL5Q7RTU5 278 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 PASD1Q8IV76 773 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 TMEM105Q8N8V8 129 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 EPS8L1Q8TE68 723 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 SECISBP2LQ93073 1101 aaKnown RBP16.91■□□□□ 0.3
USB1-215ENST00000569252 MIS12Q9H081 205 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 FBXO44Q9H4M3 255 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 CSNK1G1Q9HCP0 422 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 PNPLA8Q9NP80 782 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 ST7Q9NRC1 585 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 COMMD8Q9NX08 183 aa16.91■□□□□ 0.3
USB1-215ENST00000569252 UXTQ9UBK9 157 aaPredicted RBP16.91■□□□□ 0.3
USB1-215ENST00000569252 MAGED2Q9UNF1 606 aaPredicted RBP16.91■□□□□ 0.3
USB1-215ENST00000569252 RFPL2O75678 378 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 VNN2O95498 520 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 FGF19O95750 216 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 LSM8O95777 96 aaKnown RBP16.9■□□□□ 0.3
USB1-215ENST00000569252 PRKCIP41743 596 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 ACADSBP45954 432 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 ITIH3Q06033 890 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 PDE4CQ08493 712 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 RARS2Q5T160 578 aaKnown RBP16.9■□□□□ 0.3
USB1-215ENST00000569252 DENND1BQ6P3S1 775 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 TMC5Q6UXY8 1006 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 DNAJB7Q7Z6W7 309 aaPredicted RBP16.9■□□□□ 0.3
USB1-215ENST00000569252 TTC30AQ86WT1 665 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 TTC9BQ8N6N2 239 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 CMASQ8NFW8 434 aaPredicted RBP16.9■□□□□ 0.3
USB1-215ENST00000569252 SMG7Q92540 1137 aaKnown RBP16.9■□□□□ 0.3
USB1-215ENST00000569252 HSFY1Q96LI6 401 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms