RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 TTI2Q6NXR4 508 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 SCARA5Q6ZMJ2 495 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 KIAA2013Q8IYS2 634 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 SYNPOQ8N3V7 929 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 TTC16Q8NEE8 873 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 SLC22A12Q96S37 553 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 TTLL2Q9BWV7 592 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 VRTNQ9H8Y1 702 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 NCDNQ9UBB6 729 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 FRMD4BQ9Y2L6 1034 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 SPAG17Q6Q759 2223 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 C2orf78A6NCI8 922 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 OTOL1A6NHN0 477 aaPredicted RBP13.7□□□□□ -0.22
TSC2-220ENST00000568238 CETN3O15182 167 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 AKAP3O75969 853 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 PAPSS2O95340 614 aaPredicted RBP13.7□□□□□ -0.22
TSC2-220ENST00000568238 ARSAP15289 507 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 IFNAR2P48551 515 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 USP46P62068 366 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 NOP14P78316 857 aaKnown RBP13.7□□□□□ -0.22
TSC2-220ENST00000568238 AMPD2Q01433 879 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 GRSF1Q12849 480 aaKnown RBP eCLIP13.7□□□□□ -0.22
TSC2-220ENST00000568238 STX1AQ16623 288 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 FAM186BQ8IYM0 893 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 CPA6Q8N4T0 437 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 DCLK2Q8N568 766 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 ARL14EPQ8N8R7 260 aaPredicted RBP13.7□□□□□ -0.22
TSC2-220ENST00000568238 OSCP1Q8WVF1 389 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 SECISBP2LQ93073 1101 aaKnown RBP13.7□□□□□ -0.22
TSC2-220ENST00000568238 ATP2A3Q93084 1043 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 C8orf48Q96LL4 319 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 CYP2S1Q96SQ9 504 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 DUSP9Q99956 384 aaKnown RBP13.7□□□□□ -0.22
TSC2-220ENST00000568238 ZNF518BQ9C0D4 1074 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 DUS2Q9NX74 493 aaKnown RBP13.7□□□□□ -0.22
TSC2-220ENST00000568238 TRPM5Q9NZQ8 1165 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 GCNT4Q9P109 453 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 DACH1Q9UI36 760 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 RWDD2AQ9UIY3 292 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 ARHGAP26Q9UNA1 814 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 LAMA1P25391 3075 aa13.7□□□□□ -0.22
TSC2-220ENST00000568238 ATP8B3O60423 1300 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 SYCE3A1L190 88 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 C4BPAP04003 597 aaKnown RBP13.69□□□□□ -0.22
TSC2-220ENST00000568238 P4HA1P13674 534 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 PFKLP17858 780 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 PSMC2P35998 433 aaKnown RBP13.69□□□□□ -0.22
TSC2-220ENST00000568238 RAP1GAPP47736 663 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 ID4P47928 161 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 PPP3CCP48454 512 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 CACNA2D1P54289 1103 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 CDH8P55286 799 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 FKBP3Q00688 224 aaKnown RBP13.69□□□□□ -0.22
TSC2-220ENST00000568238 TYRO3Q06418 890 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 ZACNQ401N2 412 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 TMEM196Q5HYL7 178 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 C11orf57Q6ZUT1 292 aaPredicted RBP13.69□□□□□ -0.22
TSC2-220ENST00000568238 SH3RF2Q8TEC5 729 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 EXOC4Q96A65 974 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 CHFRQ96EP1 664 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 B3GNT5Q9BYG0 378 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 TMEM30AQ9NV96 361 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 ANO10Q9NW15 660 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 RAB23Q9ULC3 237 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 WNT6Q9Y6F9 365 aa13.69□□□□□ -0.22
TSC2-220ENST00000568238 RALGAPA1Q6GYQ0 2036 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 K7ESF4 209 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 CLDN5O00501 218 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 TRDMT1O14717 391 aaKnown RBP13.68□□□□□ -0.22
TSC2-220ENST00000568238 VNN1O95497 513 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 EPB41P11171 864 aaKnown RBP13.68□□□□□ -0.22
TSC2-220ENST00000568238 TCF3P15923 654 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 HDCP19113 662 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 PIK3CAP42336 1068 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 DLG4P78352 724 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 EML3Q32P44 896 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 ZSCAN23Q3MJ62 389 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 FSTL4Q6MZW2 842 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 FAM35AQ86V20 835 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 ZC3H3Q8IXZ2 948 aaKnown RBP13.68□□□□□ -0.22
TSC2-220ENST00000568238 TMC2Q8TDI7 906 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 TNIP3Q96KP6 325 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 SLITRK1Q96PX8 696 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 MED15Q96RN5 788 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 ECT2Q9H8V3 914 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 C2orf42Q9NWW7 574 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 GMEB2Q9UKD1 530 aa13.68□□□□□ -0.22
TSC2-220ENST00000568238 EML5Q05BV3 1969 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 ZNF840PA6NDX5 716 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 CHURC1-FNTBB4DL54 471 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 IKBKBO14920 756 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 MAPK13O15264 365 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 SLC16A3O15427 465 aaKnown RBP13.67□□□□□ -0.22
TSC2-220ENST00000568238 RTN3O95197 1032 aaPredicted RBP13.67□□□□□ -0.22
TSC2-220ENST00000568238 LETM1O95202 739 aaPredicted RBP13.67□□□□□ -0.22
TSC2-220ENST00000568238 NFATC1O95644 943 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 ABL1P00519 1130 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 TRIM49P0CI25 452 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 TRIM49CP0CI26 452 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 KRT13P13646 458 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms