RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 PDGFBP01127 241 aaPredicted RBP10.37□□□□□ -0.75
CLK3-220ENST00000567992 PAEPP09466 180 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 ZDHHC11BP0C7U3 371 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 PTMSP20962 102 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 PGFP49763 221 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 GPC5P78333 572 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 FCHO2Q0JRZ9 810 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 TAF10Q12962 218 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 GRM2Q14416 872 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 GOLGA7BQ2TAP0 167 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 PKDCCQ504Y2 493 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 ARHGAP15Q53QZ3 475 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 GPIHBP1Q8IV16 184 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 CMTM8Q8IZV2 173 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 AOPEPQ8N6M6 819 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 MAB21L3Q8N8X9 362 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 RBBP8NLQ8NC74 664 aaPredicted RBP10.37□□□□□ -0.75
CLK3-220ENST00000567992 MRPS31Q92665 395 aaKnown RBP10.37□□□□□ -0.75
CLK3-220ENST00000567992 USP13Q92995 863 aaPredicted RBP10.37□□□□□ -0.75
CLK3-220ENST00000567992 JAKMIP2Q96AA8 810 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 C1QTNF1Q9BXJ1 281 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 ZFP14Q9HCL3 533 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 PNPLA8Q9NP80 782 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 UBE2TQ9NPD8 197 aaPredicted RBP10.37□□□□□ -0.75
CLK3-220ENST00000567992 LIMA1Q9UHB6 759 aaKnown RBP10.37□□□□□ -0.75
CLK3-220ENST00000567992 ZMYM5Q9UJ78 669 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 TSPAN16Q9UKR8 245 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 CCL26Q9Y258 94 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 PCDHB4Q9Y5E5 795 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 ZDBF2Q9HCK1 2354 aa10.37□□□□□ -0.75
CLK3-220ENST00000567992 PRR33A8MZF0 331 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 TULP2O00295 520 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 RTN3O95197 1032 aaPredicted RBP10.36□□□□□ -0.75
CLK3-220ENST00000567992 OAS1P00973 400 aaKnown RBP10.36□□□□□ -0.75
CLK3-220ENST00000567992 CFHP08603 1231 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 VDRP11473 427 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 ATP1A3P13637 1013 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 CD19P15391 556 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 TRIM21P19474 475 aaKnown RBP10.36□□□□□ -0.75
CLK3-220ENST00000567992 YWHAQP27348 245 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 KIF11P52732 1056 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 IFRD2Q12894 506 aaPredicted RBP10.36□□□□□ -0.75
CLK3-220ENST00000567992 ZNF268Q14587 947 aaPredicted RBP10.36□□□□□ -0.75
CLK3-220ENST00000567992 IQCB1Q15051 598 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 ZSCAN23Q3MJ62 389 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 SGO2Q562F6 1265 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 SNX30Q5VWJ9 437 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 HFE2Q6ZVN8 426 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 ENOSF1Q7L5Y1 443 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 MFSD6LQ8IWD5 586 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 ANKRD52Q8NB46 1076 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 DEPDC1BQ8WUY9 529 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 OVCA2Q8WZ82 227 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 SHC3Q92529 594 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 LRFN3Q9BTN0 628 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 NAA15Q9BXJ9 866 aaKnown RBP10.36□□□□□ -0.75
CLK3-220ENST00000567992 ACP6Q9NPH0 428 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 COMMD8Q9NX08 183 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 OBP2AQ9NY56 170 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 EHD2Q9NZN4 543 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 TRPM5Q9NZQ8 1165 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 GMIPQ9P107 970 aa10.36□□□□□ -0.75
CLK3-220ENST00000567992 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLK3-220ENST00000567992 KRBA1A5PL33 1030 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 LRRC10BA6NIK2 292 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 SHISA7A6NL88 538 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 CYP26A1O43174 497 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 PSMC3P17980 439 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 BRD2P25440 801 aaKnown RBP10.35□□□□□ -0.75
CLK3-220ENST00000567992 PPP3CCP48454 512 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 KLK7P49862 253 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 COPB1P53618 953 aaKnown RBP10.35□□□□□ -0.75
CLK3-220ENST00000567992 BCAT1P54687 386 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 ZXDBP98169 803 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 PDE4CQ08493 712 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 USP4Q13107 963 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 ZNF77Q15935 545 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 RAB41Q5JT25 222 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 TMEM31Q5JXX7 168 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 CWF19L1Q69YN2 538 aaKnown RBP10.35□□□□□ -0.75
CLK3-220ENST00000567992 LCLAT1Q6UWP7 414 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 BHLHA9Q7RTU4 235 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 BMP8AQ7Z5Y6 402 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 PIGZQ86VD9 579 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 ARL14EPQ8N8R7 260 aaPredicted RBP10.35□□□□□ -0.75
CLK3-220ENST00000567992 FBXO32Q969P5 355 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 E2F7Q96AV8 911 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 SLITRK1Q96PX8 696 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 CYP2S1Q96SQ9 504 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 UBXN6Q9BZV1 441 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 DNAI2Q9GZS0 605 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 NAT10Q9H0A0 1025 aaKnown RBP10.35□□□□□ -0.75
CLK3-220ENST00000567992 RNF38Q9H0F5 515 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 VPS16Q9H269 839 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 GANQ9H2C0 597 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 NMUR1Q9HB89 426 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 TRPC7Q9HCX4 862 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 OSER1Q9NX31 292 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 WNT16Q9UBV4 365 aa10.35□□□□□ -0.75
CLK3-220ENST00000567992 KIAA1257Q9ULG3 409 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms