RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 CITO14578 2027 aa18.57■□□□□ 0.56
CMTM3-214ENST00000567572 TREHO43280 583 aa18.57■□□□□ 0.56
CMTM3-214ENST00000567572 LRCH4O75427 683 aa18.57■□□□□ 0.56
CMTM3-214ENST00000567572 NPTXRO95502 500 aa18.57■□□□□ 0.56
CMTM3-214ENST00000567572 P4HA1P13674 534 aa18.57■□□□□ 0.56
CMTM3-214ENST00000567572 SKIV2L2P42285 1042 aaKnown RBP18.57■□□□□ 0.56
CMTM3-214ENST00000567572 SLC27A1Q6PCB7 646 aa18.57■□□□□ 0.56
CMTM3-214ENST00000567572 APBB1IPQ7Z5R6 666 aaPredicted RBP18.57■□□□□ 0.56
CMTM3-214ENST00000567572 DNAJB3Q8WWF6 145 aa18.57■□□□□ 0.56
CMTM3-214ENST00000567572 MIS12Q9H081 205 aa18.57■□□□□ 0.56
CMTM3-214ENST00000567572 RXFP1Q9HBX9 757 aa18.57■□□□□ 0.56
CMTM3-214ENST00000567572 PSMC3IPQ9P2W1 217 aaPredicted RBP18.57■□□□□ 0.56
CMTM3-214ENST00000567572 NXF1Q9UBU9 619 aaKnown RBP18.57■□□□□ 0.56
CMTM3-214ENST00000567572 TMEM88BA6NKF7 163 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 SGK1O00141 431 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 GCAP28676 217 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 SLC8A1P32418 973 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 PSMC4P43686 418 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 GABRB2P47870 512 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 ZNF200P98182 395 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-214ENST00000567572 SPARCL1Q14515 664 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 HIF1AQ16665 826 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 EFHC2Q5JST6 749 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 DENND1BQ6P3S1 775 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 NOTUMQ6P988 496 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 GLIS1Q8NBF1 620 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 TRIB2Q92519 343 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 KLHL14Q9P2G3 628 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 ITGA11Q9UKX5 1188 aa18.56■□□□□ 0.56
CMTM3-214ENST00000567572 C17orf102A2RUQ5 167 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 MYADML2A6NDP7 307 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 ASMTLO95671 621 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 RFC1P35251 1148 aaPredicted RBP18.55■□□□□ 0.56
CMTM3-214ENST00000567572 ARL4CP56559 192 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 CBLBQ13191 982 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 ZNF394Q53GI3 561 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 ATP11CQ8NB49 1132 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 SMC1BQ8NDV3 1235 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 SMC6Q96SB8 1091 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 SDCBP2Q9H190 292 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 ABCF3Q9NUQ8 709 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 TBK1Q9UHD2 729 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 GABRQQ9UN88 632 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 STARD13Q9Y3M8 1113 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 E7ESA3 106 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 STAU1O95793 577 aaKnown RBP18.55■□□□□ 0.56
CMTM3-214ENST00000567572 ALDH1A1P00352 501 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 HMGCRP04035 888 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 CD19P15391 556 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 KDELR1P24390 212 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 PCK1P35558 622 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 RAD23BP54727 409 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 GJA9P57773 515 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 PSMC1P62191 440 aaKnown RBP18.55■□□□□ 0.56
CMTM3-214ENST00000567572 ELF3P78545 371 aaPredicted RBP18.55■□□□□ 0.56
CMTM3-214ENST00000567572 PLCB3Q01970 1234 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 BNIP1Q12981 228 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 SNX17Q15036 470 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 KLHL38Q2WGJ6 581 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 CYP4A22Q5TCH4 519 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 TXNRD3NBQ6F5E7 133 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 XYLT1Q86Y38 959 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 DENND1AQ8TEH3 1009 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 TMEM40Q8WWA1 233 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 MCRS1Q96EZ8 462 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 EIF2AQ9BY44 585 aaKnown RBP18.55■□□□□ 0.56
CMTM3-214ENST00000567572 PLEKHA5Q9HAU0 1116 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 DERAQ9Y315 318 aa18.55■□□□□ 0.56
CMTM3-214ENST00000567572 TRIP12Q14669 1992 aaPredicted RBP18.54■□□□□ 0.56
CMTM3-214ENST00000567572 APOC4-APOC2K7ER74 178 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 KIF3CO14782 793 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 KPNA6O60684 536 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 ATP2C2O75185 946 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 APOC2P02655 101 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 TAC1P20366 129 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 AXLP30530 894 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 RAP1GAPP47736 663 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 PTPN11Q06124 597 aaPredicted RBP18.54■□□□□ 0.56
CMTM3-214ENST00000567572 MYO1EQ12965 1108 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 MFSD14CQ5VZR4 134 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 ZBED8Q8IZ13 594 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 C7orf31Q8N865 590 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 CMASQ8NFW8 434 aaPredicted RBP18.54■□□□□ 0.56
CMTM3-214ENST00000567572 GDAP1Q8TB36 358 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 ACTL9Q8TC94 416 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 SNX27Q96L92 541 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 TMEM121Q9BTD3 319 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 TRABDQ9H4I3 376 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 SMYD3Q9H7B4 428 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 VPS37BQ9H9H4 285 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 DPP3Q9NY33 737 aa18.54■□□□□ 0.56
CMTM3-214ENST00000567572 CILPO75339 1184 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 UBOX5O94941 541 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 C6orf222P0C671 652 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-214ENST00000567572 ZSCAN5DPP0CG00 497 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 GNAT1P11488 350 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 FLT3LGP49771 235 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 GEMIN4P57678 1058 aaKnown RBP18.53■□□□□ 0.56
CMTM3-214ENST00000567572 OTUD4Q01804 1114 aaKnown RBP18.53■□□□□ 0.56
CMTM3-214ENST00000567572 RPAINQ86UA6 219 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms