RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 IVDP26440 423 aa24.39■■□□□ 1.49
LINC00543-201ENST00000567234 KCTD19Q17RG1 926 aaPredicted RBP24.39■■□□□ 1.49
LINC00543-201ENST00000567234 RNF187Q5TA31 235 aaPredicted RBP24.39■■□□□ 1.49
LINC00543-201ENST00000567234 TTC30AQ86WT1 665 aa24.39■■□□□ 1.49
LINC00543-201ENST00000567234 ZDHHC17Q8IUH5 632 aa24.39■■□□□ 1.49
LINC00543-201ENST00000567234 HACE1Q8IYU2 909 aa24.39■■□□□ 1.49
LINC00543-201ENST00000567234 CCDC89Q8N998 374 aa24.39■■□□□ 1.49
LINC00543-201ENST00000567234 BBOF1Q8ND07 529 aa24.39■■□□□ 1.49
LINC00543-201ENST00000567234 CCHCR1Q8TD31 782 aa24.39■■□□□ 1.49
LINC00543-201ENST00000567234 KBTBD7Q8WVZ9 684 aa24.39■■□□□ 1.49
LINC00543-201ENST00000567234 CCDC114Q96M63 670 aa24.39■■□□□ 1.49
LINC00543-201ENST00000567234 FRMD8P1Q9BZ68 369 aaPredicted RBP24.39■■□□□ 1.49
LINC00543-201ENST00000567234 SENP6Q9GZR1 1112 aaPredicted RBP24.39■■□□□ 1.49
LINC00543-201ENST00000567234 KLHL11Q9NVR0 708 aa24.39■■□□□ 1.49
LINC00543-201ENST00000567234 DRG1Q9Y295 367 aaKnown RBP24.39■■□□□ 1.49
LINC00543-201ENST00000567234 C3orf70A6NLC5 250 aaPredicted RBP24.38■■□□□ 1.49
LINC00543-201ENST00000567234 A8MXQ7 604 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 E5RJQ4 531 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 LIASO43766 372 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 DNAJC8O75937 253 aaPredicted RBP24.38■■□□□ 1.49
LINC00543-201ENST00000567234 NUDT17P0C025 328 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 MYZAPP0CAP1 466 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 GPD1P21695 349 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 GNL1P36915 607 aaPredicted RBP24.38■■□□□ 1.49
LINC00543-201ENST00000567234 ZNF844Q08AG5 666 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 EMC1Q8N766 993 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 ARRDC4Q8NCT1 418 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 APPL2Q8NEU8 664 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 CYLDQ9NQC7 956 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 BATF3Q9NR55 127 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 WBP1LQ9NX94 342 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 TRIM17Q9Y577 477 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 C2CD4BA6NLJ0 364 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 GNRH1P01148 92 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 RARGP13631 454 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 KRT10P13645 584 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 SOX4Q06945 474 aaPredicted RBP24.38■■□□□ 1.49
LINC00543-201ENST00000567234 OR6B2Q6IFH4 312 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 FAM183BPQ6ZVS7 135 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 ZNF365Q70YC5 407 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 TOP6BLQ8N6T0 577 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 CMASQ8NFW8 434 aaPredicted RBP24.38■■□□□ 1.49
LINC00543-201ENST00000567234 PPP1R10Q96QC0 940 aaKnown RBP24.38■■□□□ 1.49
LINC00543-201ENST00000567234 KDM4CQ9H3R0 1056 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 SLC38A7Q9NVC3 462 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 ST3GAL5Q9UNP4 418 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 PTCH2Q9Y6C5 1203 aa24.38■■□□□ 1.49
LINC00543-201ENST00000567234 SPTLC1O15269 473 aa24.37■■□□□ 1.49
LINC00543-201ENST00000567234 TRAPPC3O43617 180 aa24.37■■□□□ 1.49
LINC00543-201ENST00000567234 ATF2P15336 505 aa24.37■■□□□ 1.49
LINC00543-201ENST00000567234 CST5P28325 142 aaPredicted RBP24.37■■□□□ 1.49
LINC00543-201ENST00000567234 MAP3K21Q5TCX8 1036 aa24.37■■□□□ 1.49
LINC00543-201ENST00000567234 KAZNQ674X7 775 aa24.37■■□□□ 1.49
LINC00543-201ENST00000567234 PMF1Q6P1K2 205 aa24.37■■□□□ 1.49
LINC00543-201ENST00000567234 CYB5D1Q6P9G0 228 aa24.37■■□□□ 1.49
LINC00543-201ENST00000567234 RHBDF2Q6PJF5 856 aa24.37■■□□□ 1.49
LINC00543-201ENST00000567234 FUKQ8N0W3 1084 aa24.37■■□□□ 1.49
LINC00543-201ENST00000567234 KLHDC9Q8NEP7 349 aa24.37■■□□□ 1.49
LINC00543-201ENST00000567234 SNX25Q9H3E2 840 aa24.37■■□□□ 1.49
LINC00543-201ENST00000567234 XPNPEP3Q9NQH7 507 aa24.37■■□□□ 1.49
LINC00543-201ENST00000567234 DPYSL4O14531 572 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 HUS1O60921 280 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 GSTA1P08263 222 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 KDELR1P24390 212 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 IL1R2P27930 398 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 SCNN1AP37088 669 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 LILRA4P59901 499 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 ADCY2Q08462 1091 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 MGAT3Q09327 533 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 BYSLQ13895 437 aaKnown RBP24.36■■□□□ 1.49
LINC00543-201ENST00000567234 DNAJC5GQ8N7S2 189 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 ANKRD52Q8NB46 1076 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 TTC13Q8NBP0 860 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 NKD2Q969F2 451 aaPredicted RBP24.36■■□□□ 1.49
LINC00543-201ENST00000567234 TRAIPQ9BWF2 469 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 FAM49BQ9NUQ9 324 aa24.36■■□□□ 1.49
LINC00543-201ENST00000567234 PTGESO14684 152 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 TP73O15350 636 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 TRUB2O95900 331 aaKnown RBP24.35■■□□□ 1.49
LINC00543-201ENST00000567234 CHRNA1P02708 482 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 WARSP23381 471 aaKnown RBP24.35■■□□□ 1.49
LINC00543-201ENST00000567234 MIPP30301 263 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 RPL34P49207 117 aaKnown RBP24.35■■□□□ 1.49
LINC00543-201ENST00000567234 ATP1A2P50993 1020 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 BCAT1P54687 386 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 GUCY1A3Q02108 690 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 BST2Q10589 180 aaKnown RBP24.35■■□□□ 1.49
LINC00543-201ENST00000567234 IFT88Q13099 833 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 OLFML1Q6UWY5 402 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 PXYLP1Q8TE99 480 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 CENPTQ96BT3 561 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 TNIP3Q96KP6 325 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 EPB41L4BQ9H329 900 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 ZWILCHQ9H900 591 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 CNOT10Q9H9A5 744 aaKnown RBP24.35■■□□□ 1.49
LINC00543-201ENST00000567234 FAM105AQ9NUU6 356 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 USP18Q9UMW8 372 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 GPR182O15218 404 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 INHAP05111 366 aa24.35■■□□□ 1.49
LINC00543-201ENST00000567234 PDGFRAP16234 1089 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms