RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 SMARCB1Q12824 385 aa10.46□□□□□ -0.73
CAPN3-216ENST00000567071 KCNB1Q14721 858 aa10.46□□□□□ -0.73
CAPN3-216ENST00000567071 SLC39A12Q504Y0 691 aa10.46□□□□□ -0.73
CAPN3-216ENST00000567071 XKR4Q5GH76 650 aa10.46□□□□□ -0.73
CAPN3-216ENST00000567071 KIAA1614Q5VZ46 1190 aa10.46□□□□□ -0.73
CAPN3-216ENST00000567071 KIAA1324Q6UXG2 1013 aaKnown RBP10.46□□□□□ -0.73
CAPN3-216ENST00000567071 MAEAQ7L5Y9 396 aa10.46□□□□□ -0.73
CAPN3-216ENST00000567071 LSMEM2Q8N112 164 aa10.46□□□□□ -0.73
CAPN3-216ENST00000567071 MCPH1Q8NEM0 835 aa10.46□□□□□ -0.73
CAPN3-216ENST00000567071 CADM4Q8NFZ8 388 aa10.46□□□□□ -0.73
CAPN3-216ENST00000567071 C2orf15Q8WU43 125 aaKnown RBP10.46□□□□□ -0.73
CAPN3-216ENST00000567071 C18orf25Q96B23 403 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-216ENST00000567071 ZFRQ96KR1 1074 aaKnown RBP10.46□□□□□ -0.73
CAPN3-216ENST00000567071 ARHGAP9Q9BRR9 750 aa10.46□□□□□ -0.73
CAPN3-216ENST00000567071 VAV3Q9UKW4 847 aa10.46□□□□□ -0.73
CAPN3-216ENST00000567071 SMC3Q9UQE7 1217 aa10.46□□□□□ -0.73
CAPN3-216ENST00000567071 MAN2B2Q9Y2E5 1009 aa10.46□□□□□ -0.73
CAPN3-216ENST00000567071 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-216ENST00000567071 CACNA1DQ01668 2161 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 TMEM131Q92545 1883 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 ANO9A1A5B4 782 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 SLC9A3R1O14745 358 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-216ENST00000567071 EDIL3O43854 480 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 LDOC1O95751 146 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-216ENST00000567071 ADH1CP00326 375 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 CYP17A1P05093 508 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 SFTPCP11686 197 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 ODC1P11926 461 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 TYMPP19971 482 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 ATP2B1P20020 1258 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 GJB2P29033 226 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 AFMP43652 599 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 NLRP5P59047 1200 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 PPP2R5AQ15172 486 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 ZNF568Q3ZCX4 644 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 DCAF12L1Q5VU92 463 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 CPLX2Q6PUV4 134 aaKnown RBP10.45□□□□□ -0.74
CAPN3-216ENST00000567071 ALKAL1Q6UXT8 129 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 TMEM150AQ86TG1 271 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 SFTPA1Q8IWL2 248 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 FSIP1Q8NA03 581 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 SPPL2BQ8TCT7 592 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 IGSF8Q969P0 613 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 INTS4Q96HW7 963 aaKnown RBP10.45□□□□□ -0.74
CAPN3-216ENST00000567071 CNDP2Q96KP4 475 aaKnown RBP10.45□□□□□ -0.74
CAPN3-216ENST00000567071 ZMAT2Q96NC0 199 aaKnown RBP10.45□□□□□ -0.74
CAPN3-216ENST00000567071 GPR174Q9BXC1 333 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 CNTN3Q9P232 1028 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 USP20Q9Y2K6 914 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-216ENST00000567071 ICE1Q9Y2F5 2266 aa10.45□□□□□ -0.74
CAPN3-216ENST00000567071 A0A0A0MRY4 1105 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 K7ENP7 123 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 DFNA5O60443 496 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 CDKL5O76039 1030 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 TCF3P15923 654 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 TNFSF9P41273 254 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 WASP42768 502 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 SLC6A11P48066 632 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 CSNK1EP49674 416 aaKnown RBP10.44□□□□□ -0.74
CAPN3-216ENST00000567071 EFNA5P52803 228 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 NFKB2Q00653 900 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 BNC1Q01954 994 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 TLE1Q04724 770 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 NTRK3Q16288 839 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 BTBD8Q5XKL5 378 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 FBXL19Q6PCT2 694 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 INO80CQ6PI98 192 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-216ENST00000567071 CACTIN-AS1Q8N1I8 211 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 FAM26EQ8N5C1 309 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 IPO4Q8TEX9 1081 aaKnown RBP10.44□□□□□ -0.74
CAPN3-216ENST00000567071 TOE1Q96GM8 510 aaKnown RBP10.44□□□□□ -0.74
CAPN3-216ENST00000567071 PSMG3-AS1Q96PY0 264 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 LLPHQ9BRT6 129 aaKnown RBP10.44□□□□□ -0.74
CAPN3-216ENST00000567071 SLC26A6Q9BXS9 759 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 RPF1Q9H9Y2 349 aaKnown RBP10.44□□□□□ -0.74
CAPN3-216ENST00000567071 STARD5Q9NSY2 213 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 HSPBP1Q9NZL4 362 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-216ENST00000567071 EIF2B4Q9UI10 523 aaKnown RBP10.44□□□□□ -0.74
CAPN3-216ENST00000567071 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 CLCA2Q9UQC9 943 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 LRBAP50851 2863 aa10.44□□□□□ -0.74
CAPN3-216ENST00000567071 SETD2Q9BYW2 2564 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-216ENST00000567071 BLACEA4D250 179 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 BTBD18B2RXH4 712 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 LYPLA2O95372 231 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 NFICP08651 508 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 HAPLN1P10915 354 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-216ENST00000567071 ADH5P11766 374 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 HMGA1P17096 107 aaKnown RBP10.43□□□□□ -0.74
CAPN3-216ENST00000567071 IFNAR1P17181 557 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 NAMPTP43490 491 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 RARRES1P49788 294 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 INHBCP55103 352 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 ERVPABLB-1P60509 514 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 SSRP1Q08945 709 aaKnown RBP10.43□□□□□ -0.74
CAPN3-216ENST00000567071 DHCR24Q15392 516 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 KIF19Q2TAC6 998 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 GAB4Q2WGN9 574 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms