RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 C12orf76Q8N812 135 aaPredicted RBP12.13□□□□□ -0.47
KARS-207ENST00000566560 ANKRD52Q8NB46 1076 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 STKLD1Q8NE28 680 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 ZMIZ2Q8NF64 920 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 CMASQ8NFW8 434 aaPredicted RBP12.13□□□□□ -0.47
KARS-207ENST00000566560 SLC20A1Q8WUM9 679 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 ZNF606Q8WXB4 792 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 SECISBP2LQ93073 1101 aaKnown RBP12.13□□□□□ -0.47
KARS-207ENST00000566560 C8orf48Q96LL4 319 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 SMOQ99835 787 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 APOL5Q9BWW9 433 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 DUSP16Q9BY84 665 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 PDCL3Q9H2J4 239 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 UBE2ZQ9H832 354 aaPredicted RBP12.13□□□□□ -0.47
KARS-207ENST00000566560 CLEC1BQ9P126 229 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 NOCTQ9UK39 431 aaKnown RBP12.13□□□□□ -0.47
KARS-207ENST00000566560 CEP83Q9Y592 693 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 DOCK6Q96HP0 2047 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 CCDC195A0A1B0GUA6 201 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 GOLGA6L6A8MZA4 724 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 XPO1O14980 1071 aaKnown RBP12.12□□□□□ -0.47
KARS-207ENST00000566560 BEST1O76090 585 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 POU2F2P09086 479 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 KCNA5P22460 613 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 LTBRP36941 435 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 MRE11P49959 708 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 SLC5A3P53794 718 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 PDE4CQ08493 712 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 GOLGA8FQ08AF8 430 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 GOLGA8DPQ0D2H9 430 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 TBX2Q13207 712 aaPredicted RBP12.12□□□□□ -0.47
KARS-207ENST00000566560 CLUL1Q15846 466 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 PKDCCQ504Y2 493 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 TDRD12Q587J7 1177 aaKnown RBP12.12□□□□□ -0.47
KARS-207ENST00000566560 DENND1BQ6P3S1 775 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 SYCE2Q6PIF2 218 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 TMC5Q6UXY8 1006 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 ITIH5Q86UX2 942 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 ZNF677Q86XU0 584 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 UBA3Q8TBC4 463 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 GPR152Q8TDT2 470 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 GIPC2Q8TF65 315 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 SMG7Q92540 1137 aaKnown RBP12.12□□□□□ -0.47
KARS-207ENST00000566560 SYN2Q92777 582 aaPredicted RBP12.12□□□□□ -0.47
KARS-207ENST00000566560 PSMG2Q969U7 264 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 ZNF707Q96C28 371 aaPredicted RBP12.12□□□□□ -0.47
KARS-207ENST00000566560 SPATA17Q96L03 361 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 KCNK16Q96T55 309 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 PRKD2Q9BZL6 878 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 PIDD1Q9HB75 910 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 CSNK1G1Q9HCP0 422 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 PNPLA8Q9NP80 782 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 ABHD10Q9NUJ1 306 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 AIPL1Q9NZN9 384 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 PCDHGC3Q9UN70 934 aa12.12□□□□□ -0.47
KARS-207ENST00000566560 SLC38A8A6NNN8 435 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 AKR1B15C9JRZ8 316 aaPredicted RBP12.11□□□□□ -0.47
KARS-207ENST00000566560 H3BQ06 376 aaPredicted RBP12.11□□□□□ -0.47
KARS-207ENST00000566560 MMEP08473 750 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 CFHP08603 1231 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 CSH1P0DML2 217 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 CSH2P0DML3 217 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 PLA2G4AP47712 749 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 CDR2Q01850 454 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 KLHL30Q0D2K2 578 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 IFRD2Q12894 506 aaPredicted RBP12.11□□□□□ -0.47
KARS-207ENST00000566560 TAF12Q16514 161 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 CES5AQ6NT32 575 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 DENND5BQ6ZUT9 1274 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 GPRIN1Q7Z2K8 1008 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 PIGZQ86VD9 579 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 SPC24Q8NBT2 197 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 SMRP1Q8NCR6 262 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 C1orf131Q8NDD1 294 aaKnown RBP12.11□□□□□ -0.47
KARS-207ENST00000566560 FEZF2Q8TBJ5 459 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 DDX1Q92499 740 aaKnown RBP12.11□□□□□ -0.47
KARS-207ENST00000566560 HLA-CQ95604 372 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 MSLNLQ96KJ4 702 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 CEP295NLQ96MC4 621 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 DNAJC7Q99615 494 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 ASAH2Q9NR71 780 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 SEPT11Q9NVA2 429 aaKnown RBP12.11□□□□□ -0.47
KARS-207ENST00000566560 CD207Q9UJ71 328 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 ASB3Q9Y575 518 aa12.11□□□□□ -0.47
KARS-207ENST00000566560 NOTCH4Q99466 2003 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 DENND4CQ5VZ89 1909 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 HHLA1C9JL84 531 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 TULP2O00295 520 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 PAPLNO95428 1278 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 LSM8O95777 96 aaKnown RBP12.1□□□□□ -0.47
KARS-207ENST00000566560 PRKCIP41743 596 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 RGS7P49802 495 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 ADKP55263 362 aaKnown RBP12.1□□□□□ -0.47
KARS-207ENST00000566560 FMO1Q01740 532 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 ITIH3Q06033 890 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 ADIGQ0VDE8 80 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 PDCLQ13371 301 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 MTMR3Q13615 1198 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 ARID5BQ14865 1188 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 TRIM72Q6ZMU5 477 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms