RNA–Protein interactions for RNA: ENST00000566062.1

SUB1P4-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 4, humanhuman

BASIC

Gene SUB1P4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P4-201ENST00000566062 ABHD5Q8WTS1 349 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 NUP133Q8WUM0 1156 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 WDR60Q8WVS4 1066 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 ATRIPQ8WXE1 791 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 ZUFSPQ96AP4 578 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 EID2BQ96D98 161 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 NEIL1Q96FI4 390 aaPredicted RBP2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 LRIG1Q96JA1 1093 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 GNRHR2Q96P88 292 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 PNKPQ96T60 521 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 CENPOQ9BU64 300 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 DPCDQ9BVM2 203 aaPredicted RBP2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 PLA2G12BQ9BX93 195 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 SLC46A2Q9BY10 475 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 GPR63Q9BZJ6 419 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 PAIP1Q9H074 479 aaKnown RBP2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 VPS16Q9H269 839 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 UNC45AQ9H3U1 944 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 RMI1Q9H9A7 625 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 NOD2Q9HC29 1040 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 TMEM8AQ9HCN3 771 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 PREBQ9HCU5 417 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 WASH6PQ9NQA3 447 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 XPNPEP3Q9NQH7 507 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 HELLSQ9NRZ9 838 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 OLA1Q9NTK5 396 aaKnown RBP2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 BLOC1S4Q9NUP1 217 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 VSX1Q9NZR4 365 aaPredicted RBP2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 PGAP2Q9UHJ9 254 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 NRBP1Q9UHY1 535 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 EIF2B4Q9UI10 523 aaKnown RBP2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 KCND3Q9UK17 655 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 SLC13A4Q9UKG4 626 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 SMG5Q9UPR3 1016 aaKnown RBP2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 USP15Q9Y4E8 981 aaPredicted RBP2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 DTNAQ9Y4J8 743 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 PCDHB7Q9Y5E2 793 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 RPS6KL1Q9Y6S9 549 aa2.09□□□□□ -2.07
SUB1P4-201ENST00000566062 ZNF536O15090 1300 aa2.09□□□□□ -2.08
SUB1P4-201ENST00000566062 ITIH6Q6UXX5 1313 aa2.09□□□□□ -2.08
SUB1P4-201ENST00000566062 KAT6AQ92794 2004 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 SNAPC4Q5SXM2 1469 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 LAMC3Q9Y6N6 1575 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 CCDC195A0A1B0GUA6 201 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 A0A1W2PPH5 198 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 CCDC78A2IDD5 438 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 A6NCN8 305 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 C9orf118A6NHY6 69 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 B4E171 279 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 NPIPB6E9PJ23 425 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 STX16-NPEPL1H3BU86 382 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 LEFTY2O00292 366 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 MATN2O00339 956 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 STX16O14662 325 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 PCDH17O14917 1159 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 KLK10O43240 276 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 HOXC11O43248 304 aaPredicted RBP2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 CCP110O43303 1012 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 KCNQ3O43525 872 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 TAF5LO75529 589 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 TIPRLO75663 272 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 FAM155BO75949 473 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 IPO13O94829 963 aaKnown RBP2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 NTSR2O95665 410 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 GPANK1O95872 356 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 HNRNPA1P09651 372 aaKnown RBP eCLIP2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 C1QTNF9P0C862 333 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 DRD1P21728 446 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 KCNA3P22001 575 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 MGAT1P26572 445 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 SERPINA4P29622 427 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 CD6P30203 668 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 PGM1P36871 562 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 TSPAN7P41732 249 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 PAFAH1B1P43034 410 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 GSTM5P46439 218 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 MTHFSP49914 203 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 GATMP50440 423 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 TOB1P50616 345 aaPredicted RBP2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 PGDP52209 483 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 EIF5P55010 431 aaKnown RBP2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 NR1H2P55055 460 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 CASP6P55212 293 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 PPP2CBP62714 309 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 PPP2CAP67775 309 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 HSD11B2P80365 405 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 MC2RQ01718 297 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 TLE2Q04725 743 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 BFSP2Q13515 415 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 ATP1A4Q13733 1029 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 CSHL1Q14406 222 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 LY6KQ17RY6 165 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 LRRC24Q50LG9 513 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 GPATCH4Q5T3I0 446 aaKnown RBP2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 SLC9C2Q5TAH2 1124 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 NT5DC1Q5TFE4 455 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 ANKRD40Q6AI12 368 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 MFSD5Q6N075 450 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 MZT2BQ6NZ67 158 aa2.08□□□□□ -2.08
SUB1P4-201ENST00000566062 RAB11FIP2Q7L804 512 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms