RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 SLC26A9Q7LBE3 791 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 RNF168Q8IYW5 571 aaPredicted RBP23.05■■□□□ 1.28
LINC01960-201ENST00000563759 FIBCD1Q8N539 461 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 RIN2Q8WYP3 895 aaPredicted RBP23.05■■□□□ 1.28
LINC01960-201ENST00000563759 HERVK_113Q902F9 699 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 ALG3Q92685 438 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 FUBP3Q96I24 572 aaKnown RBP eCLIP23.05■■□□□ 1.28
LINC01960-201ENST00000563759 PGLYRP2Q96PD5 576 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 AAASQ9NRG9 546 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 SPG21Q9NZD8 308 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 TMEM59LQ9UK28 342 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.05■■□□□ 1.28
LINC01960-201ENST00000563759 INSL6Q9Y581 213 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 PLXNA4Q9HCM2 1894 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 F8VP50 259 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 EFEMP2O95967 443 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 GPD1P21695 349 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 CYP2F1P24903 491 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 PPM1AP35813 382 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 FLT3P36888 993 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 SCNN1AP37088 669 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 PAFAH1B1P43034 410 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 TAF5Q15542 800 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 UBXN6Q9BZV1 441 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 CARD9Q9H257 536 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 PCDHB5Q9Y5E4 795 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 PCDHA3Q9Y5H8 950 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 ZNF638Q14966 1978 aaKnown RBP23.04■■□□□ 1.28
LINC01960-201ENST00000563759 CEP290O15078 2479 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 CTAGE15A4D2H0 777 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 C2CD4BA6NLJ0 364 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 CEP104O60308 925 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 FBXO21O94952 628 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 SOD2P04179 222 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 CTAGE8P0CG41 777 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 PDGFRAP16234 1089 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 DESP17661 470 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 GRIK1P39086 918 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 PSMD5Q16401 504 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 DCAF12L1Q5VU92 463 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 GPRIN1Q7Z2K8 1008 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 CTAGE6Q86UF2 777 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 HERC6Q8IVU3 1022 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 CTAGE4Q8IX94 777 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 LRRN4CLQ8ND94 238 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 FAM149B1Q96BN6 582 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 ABHD8Q96I13 439 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 MS4A14Q96JA4 679 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 PNPLA8Q9NP80 782 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 EHD2Q9NZN4 543 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 RNF14Q9UBS8 474 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 PCDHB12Q9Y5F1 795 aa23.04■■□□□ 1.28
LINC01960-201ENST00000563759 GBF1Q92538 1859 aa23.03■■□□□ 1.28
LINC01960-201ENST00000563759 C2CD2LO14523 706 aa23.03■■□□□ 1.28
LINC01960-201ENST00000563759 PSTPIP1O43586 416 aa23.03■■□□□ 1.28
LINC01960-201ENST00000563759 ATP2A2P16615 1042 aaKnown RBP23.03■■□□□ 1.28
LINC01960-201ENST00000563759 GJC1P36383 396 aa23.03■■□□□ 1.28
LINC01960-201ENST00000563759 ZNF143P52747 638 aaPredicted RBP23.03■■□□□ 1.28
LINC01960-201ENST00000563759 RWDD2BP57060 319 aa23.03■■□□□ 1.28
LINC01960-201ENST00000563759 MRPS5P82675 430 aaKnown RBP23.03■■□□□ 1.28
LINC01960-201ENST00000563759 RAB41Q5JT25 222 aa23.03■■□□□ 1.28
LINC01960-201ENST00000563759 EFHC1Q5JVL4 640 aa23.03■■□□□ 1.28
LINC01960-201ENST00000563759 CC2D1AQ6P1N0 951 aaPredicted RBP23.03■■□□□ 1.28
LINC01960-201ENST00000563759 RHOT1Q8IXI2 618 aa23.03■■□□□ 1.28
LINC01960-201ENST00000563759 RXFP2Q8WXD0 754 aa23.03■■□□□ 1.28
LINC01960-201ENST00000563759 PIK3R5Q8WYR1 880 aa23.03■■□□□ 1.28
LINC01960-201ENST00000563759 ULBP1Q9BZM6 244 aa23.03■■□□□ 1.28
LINC01960-201ENST00000563759 CDY1Q9Y6F8 540 aa23.03■■□□□ 1.28
LINC01960-201ENST00000563759 HHLA1C9JL84 531 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 HSF2BPO75031 334 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 RNF8O76064 485 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 SDC4P31431 198 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 GLUD2P49448 558 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 NDUFV1P49821 464 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 PEX5P50542 639 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 ADCY1Q08828 1119 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 SCN4BQ8IWT1 228 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 CNPY3Q9BT09 278 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 CNGB3Q9NQW8 809 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 ASNSD1Q9NWL6 643 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 SMARCAL1Q9NZC9 954 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 MTRRQ9UBK8 725 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 GREB1Q4ZG55 1949 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 TBC1D4O60343 1298 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 ZNF211Q13398 564 aaPredicted RBP23.02■■□□□ 1.28
LINC01960-201ENST00000563759 TRNP1Q6NT89 227 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 VSTM1Q6UX27 236 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 RSPO2Q6UXX9 243 aaPredicted RBP23.02■■□□□ 1.28
LINC01960-201ENST00000563759 RNPC3Q96LT9 517 aaKnown RBP23.02■■□□□ 1.28
LINC01960-201ENST00000563759 HERC2P3Q9BVR0 1158 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 CHST7Q9NS84 486 aa23.02■■□□□ 1.28
LINC01960-201ENST00000563759 PDE2AO00408 941 aaPredicted RBP23.01■■□□□ 1.27
LINC01960-201ENST00000563759 SART1O43290 800 aaKnown RBP23.01■■□□□ 1.27
LINC01960-201ENST00000563759 TLL1O43897 1013 aa23.01■■□□□ 1.27
LINC01960-201ENST00000563759 TAS2R40P59535 323 aa23.01■■□□□ 1.27
LINC01960-201ENST00000563759 SMARCB1Q12824 385 aa23.01■■□□□ 1.27
LINC01960-201ENST00000563759 GPR17Q13304 367 aa23.01■■□□□ 1.27
LINC01960-201ENST00000563759 ACAP1Q15027 740 aa23.01■■□□□ 1.27
LINC01960-201ENST00000563759 CDO1Q16878 200 aa23.01■■□□□ 1.27
LINC01960-201ENST00000563759 SEL1L2Q5TEA6 688 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms