RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 PPP3CCP48454 512 aa22.56■■□□□ 1.2
GGA2-204ENST00000563047 TAF10Q12962 218 aa22.56■■□□□ 1.2
GGA2-204ENST00000563047 IQUBQ8NA54 791 aa22.56■■□□□ 1.2
GGA2-204ENST00000563047 XXYLT1Q8NBI6 393 aa22.56■■□□□ 1.2
GGA2-204ENST00000563047 TSTD1Q8NFU3 115 aa22.56■■□□□ 1.2
GGA2-204ENST00000563047 CCDC26Q8TAB7 109 aa22.56■■□□□ 1.2
GGA2-204ENST00000563047 TPSD1Q9BZJ3 242 aa22.56■■□□□ 1.2
GGA2-204ENST00000563047 ZNF518BQ9C0D4 1074 aa22.56■■□□□ 1.2
GGA2-204ENST00000563047 SMPD4Q9NXE4 827 aa22.56■■□□□ 1.2
GGA2-204ENST00000563047 BCLAF3A2AJT9 711 aaKnown RBP22.55■■□□□ 1.2
GGA2-204ENST00000563047 CASP1P29466 404 aa22.55■■□□□ 1.2
GGA2-204ENST00000563047 TNNC1P63316 161 aa22.55■■□□□ 1.2
GGA2-204ENST00000563047 CREB5Q02930 508 aa22.55■■□□□ 1.2
GGA2-204ENST00000563047 UNC13DQ70J99 1090 aa22.55■■□□□ 1.2
GGA2-204ENST00000563047 RASSF3Q86WH2 238 aa22.55■■□□□ 1.2
GGA2-204ENST00000563047 KIAA1958Q8N8K9 716 aa22.55■■□□□ 1.2
GGA2-204ENST00000563047 LSM14BQ9BX40 385 aaKnown RBP22.55■■□□□ 1.2
GGA2-204ENST00000563047 B3GNT5Q9BYG0 378 aa22.55■■□□□ 1.2
GGA2-204ENST00000563047 MMP17Q9ULZ9 603 aa22.55■■□□□ 1.2
GGA2-204ENST00000563047 ABCA7Q8IZY2 2146 aa22.55■■□□□ 1.2
GGA2-204ENST00000563047 UBE4BO95155 1302 aa22.55■■□□□ 1.2
GGA2-204ENST00000563047 K7ELQ4 463 aaPredicted RBP22.54■■□□□ 1.2
GGA2-204ENST00000563047 CLDN5O00501 218 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 SCAMP3O14828 347 aaKnown RBP22.54■■□□□ 1.2
GGA2-204ENST00000563047 CUTAO60888 179 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 STAU1O95793 577 aaKnown RBP22.54■■□□□ 1.2
GGA2-204ENST00000563047 CAVIN2O95810 425 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 ABL1P00519 1130 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 PMLP29590 882 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 GBP1P32455 592 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 MYL6P60660 151 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 SNRPFP62306 86 aaKnown RBP22.54■■□□□ 1.2
GGA2-204ENST00000563047 MESP2Q0VG99 397 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 DHCR24Q15392 516 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 TDRD10Q5VZ19 366 aaKnown RBP22.54■■□□□ 1.2
GGA2-204ENST00000563047 RNF43Q68DV7 783 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 SFTPA1Q8IWL2 248 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 CCDC33Q8N5R6 958 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 ZNF396Q96N95 335 aaPredicted RBP22.54■■□□□ 1.2
GGA2-204ENST00000563047 ELOVL4Q9GZR5 314 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 XYLT2Q9H1B5 865 aa22.54■■□□□ 1.2
GGA2-204ENST00000563047 A8MXQ7 604 aa22.53■■□□□ 1.2
GGA2-204ENST00000563047 YEATS4O95619 227 aa22.53■■□□□ 1.2
GGA2-204ENST00000563047 CHRM1P11229 460 aaPredicted RBP22.53■■□□□ 1.2
GGA2-204ENST00000563047 SLC6A11P48066 632 aa22.53■■□□□ 1.2
GGA2-204ENST00000563047 IFRD2Q12894 506 aaPredicted RBP22.53■■□□□ 1.2
GGA2-204ENST00000563047 ST3GAL2Q16842 350 aa22.53■■□□□ 1.2
GGA2-204ENST00000563047 USP39Q53GS9 565 aaKnown RBP22.53■■□□□ 1.2
GGA2-204ENST00000563047 PMS2CLQ68D20 193 aa22.53■■□□□ 1.2
GGA2-204ENST00000563047 ANO7Q6IWH7 933 aa22.53■■□□□ 1.2
GGA2-204ENST00000563047 RHBDF2Q6PJF5 856 aa22.53■■□□□ 1.2
GGA2-204ENST00000563047 B3GALNT2Q8NCR0 500 aa22.53■■□□□ 1.2
GGA2-204ENST00000563047 CNOT6LQ96LI5 555 aaKnown RBP22.53■■□□□ 1.2
GGA2-204ENST00000563047 SLITRK1Q96PX8 696 aa22.53■■□□□ 1.2
GGA2-204ENST00000563047 BLZF1Q9H2G9 400 aa22.53■■□□□ 1.2
GGA2-204ENST00000563047 CFAP97Q9P2B7 532 aa22.53■■□□□ 1.2
GGA2-204ENST00000563047 NXF1Q9UBU9 619 aaKnown RBP22.53■■□□□ 1.2
GGA2-204ENST00000563047 NUP205Q92621 2012 aa22.53■■□□□ 1.2
GGA2-204ENST00000563047 MYOFQ9NZM1 2061 aa22.53■■□□□ 1.2
GGA2-204ENST00000563047 KCNK5O95279 499 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 HNRNPLP14866 589 aaKnown RBP eCLIP22.52■■□□□ 1.2
GGA2-204ENST00000563047 BCKDHBP21953 392 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 TRPC3Q13507 836 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 CRY1Q16526 586 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 BMT2Q1RMZ1 405 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 TMEM92Q6UXU6 159 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 C12orf40Q86WS4 652 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 C12orf56Q8IXR9 622 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 MDGA1Q8NFP4 955 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 PLEKHO2Q8TD55 490 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 CHAMP1Q96JM3 812 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 EDEM2Q9BV94 578 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 SLC39A2Q9NP94 309 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 ANGPTL2Q9UKU9 493 aa22.52■■□□□ 1.2
GGA2-204ENST00000563047 THADAQ6YHU6 1953 aa22.51■■□□□ 1.19
GGA2-204ENST00000563047 SLC9A3R1O14745 358 aaPredicted RBP22.51■■□□□ 1.19
GGA2-204ENST00000563047 POLR2DO15514 142 aaKnown RBP22.51■■□□□ 1.19
GGA2-204ENST00000563047 MBL2P11226 248 aaPredicted RBP22.51■■□□□ 1.19
GGA2-204ENST00000563047 YWHAQP27348 245 aa22.51■■□□□ 1.19
GGA2-204ENST00000563047 ATICP31939 592 aa22.51■■□□□ 1.19
GGA2-204ENST00000563047 CASP4P49662 377 aa22.51■■□□□ 1.19
GGA2-204ENST00000563047 MRPS21P82921 87 aaKnown RBP22.51■■□□□ 1.19
GGA2-204ENST00000563047 NUP93Q8N1F7 819 aa22.51■■□□□ 1.19
GGA2-204ENST00000563047 SYAP1Q96A49 352 aaPredicted RBP22.51■■□□□ 1.19
GGA2-204ENST00000563047 KCNK16Q96T55 309 aa22.51■■□□□ 1.19
GGA2-204ENST00000563047 PNKPQ96T60 521 aa22.51■■□□□ 1.19
GGA2-204ENST00000563047 SMYD3Q9H7B4 428 aa22.51■■□□□ 1.19
GGA2-204ENST00000563047 MAGEF1Q9HAY2 307 aa22.51■■□□□ 1.19
GGA2-204ENST00000563047 EIF2DP41214 584 aaKnown RBP22.5■■□□□ 1.19
GGA2-204ENST00000563047 CDH8P55286 799 aa22.5■■□□□ 1.19
GGA2-204ENST00000563047 EMC10Q5UCC4 262 aa22.5■■□□□ 1.19
GGA2-204ENST00000563047 PAQR9Q6ZVX9 377 aa22.5■■□□□ 1.19
GGA2-204ENST00000563047 C11orf74Q86VG3 221 aa22.5■■□□□ 1.19
GGA2-204ENST00000563047 DDX42Q86XP3 938 aaKnown RBP eCLIP22.5■■□□□ 1.19
GGA2-204ENST00000563047 ALLCQ8N6M5 410 aa22.5■■□□□ 1.19
GGA2-204ENST00000563047 IL17RCQ8NAC3 791 aa22.5■■□□□ 1.19
GGA2-204ENST00000563047 FBXO32Q969P5 355 aa22.5■■□□□ 1.19
GGA2-204ENST00000563047 ZFRQ96KR1 1074 aaKnown RBP22.5■■□□□ 1.19
GGA2-204ENST00000563047 VRTNQ9H8Y1 702 aa22.5■■□□□ 1.19
GGA2-204ENST00000563047 CGNQ9P2M7 1197 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms