RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 ITFG1Q8TB96 612 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 STK32AQ8WU08 396 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 OVCA2Q8WZ82 227 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 FGF13Q92913 245 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 RPGRIP1Q96KN7 1286 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 HSFY1Q96LI6 401 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 PDCL3Q9H2J4 239 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 IL21Q9HBE4 155 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 LRRC4Q9HBW1 653 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 TRPM5Q9NZQ8 1165 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 A0A1W2PRU2 124 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 FAM92AA1XBS5 289 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 LAMP2P13473 410 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 DDX6P26196 483 aaKnown RBP eCLIP17.26■□□□□ 0.35
USB1-206ENST00000562534 GPD2P43304 727 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 SNX16P57768 344 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 USP46P62068 366 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 TAF10Q12962 218 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 SLC5A9Q2M3M2 681 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 RAB41Q5JT25 222 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 SPECC1LQ69YQ0 1117 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 GET4Q7L5D6 327 aaPredicted RBP17.26■□□□□ 0.35
USB1-206ENST00000562534 SCAMP5Q8TAC9 235 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 SHKBP1Q8TBC3 707 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 BAP1Q92560 729 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 MRPS31Q92665 395 aaKnown RBP17.26■□□□□ 0.35
USB1-206ENST00000562534 SECISBP2LQ93073 1101 aaKnown RBP17.26■□□□□ 0.35
USB1-206ENST00000562534 TCEAL4Q96EI5 215 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 TTYH3Q9C0H2 523 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 AIPL1Q9NZN9 384 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 CAPN11Q9UMQ6 739 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 SCML2Q9UQR0 700 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 LUC7L2Q9Y383 392 aaKnown RBP17.26■□□□□ 0.35
USB1-206ENST00000562534 CEP83Q9Y592 693 aa17.26■□□□□ 0.35
USB1-206ENST00000562534 MOSPD3O75425 235 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 ACADSBP45954 432 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 SFMBT2Q5VUG0 894 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 PMF1Q6P1K2 205 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 MON1AQ86VX9 555 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 ZDHHC14Q8IZN3 488 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 TDRD5Q8NAT2 981 aaKnown RBP17.25■□□□□ 0.35
USB1-206ENST00000562534 STKLD1Q8NE28 680 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 CPLX3Q8WVH0 158 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 FBXO32Q969P5 355 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 MCRS1Q96EZ8 462 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 NOX5Q96PH1 765 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 TASP1Q9H6P5 420 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 CYLDQ9NQC7 956 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 EPS15L1Q9UBC2 864 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 CHORDC1Q9UHD1 332 aaPredicted RBP17.25■□□□□ 0.35
USB1-206ENST00000562534 USP3Q9Y6I4 520 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 PTPRDP23468 1912 aa17.25■□□□□ 0.35
USB1-206ENST00000562534 NCANO14594 1321 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 LOC730098B7Z3J9 87 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 TPM1P09493 284 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 GJA1P17302 382 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 PFKLP17858 780 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 SSTR3P32745 418 aaPredicted RBP17.24■□□□□ 0.35
USB1-206ENST00000562534 PSEN1P49768 467 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 TKTL1P51854 596 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 ZBED6P86452 979 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 CDR2Q01850 454 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 ARID5AQ03989 594 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 IFRD2Q12894 506 aaPredicted RBP17.24■□□□□ 0.35
USB1-206ENST00000562534 TRIM14Q14142 442 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 TEAD2Q15562 447 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 SNX30Q5VWJ9 437 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 PM20D1Q6GTS8 502 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 DENND1BQ6P3S1 775 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 IRF2BP2Q7Z5L9 587 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 TMEM150AQ86TG1 271 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 NOP9Q86U38 636 aaKnown RBP17.24■□□□□ 0.35
USB1-206ENST00000562534 VSTM4Q8IW00 320 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 NPAS3Q8IXF0 933 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 TMEM35BQ8NCS4 154 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 EPS8L1Q8TE68 723 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 ING5Q8WYH8 240 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 DDX1Q92499 740 aaKnown RBP17.24■□□□□ 0.35
USB1-206ENST00000562534 SYN2Q92777 582 aaPredicted RBP17.24■□□□□ 0.35
USB1-206ENST00000562534 NXPE3Q969Y0 559 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 MYADMQ96S97 322 aa17.24■□□□□ 0.35
USB1-206ENST00000562534 TLR8Q9NR97 1041 aaKnown RBP17.24■□□□□ 0.35
USB1-206ENST00000562534 COL6A3P12111 3177 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 C2orf16Q68DN1 1984 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 ZNF840PA6NDX5 716 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 C19orf67A6NJJ6 358 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 LRRC53A6NM62 1247 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 C2CD4DB7Z1M9 353 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 TULP2O00295 520 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 AP5Z1O43299 807 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 ZBED1O96006 694 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 CEBPBP17676 345 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 WEE1P30291 646 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 RPL34P49207 117 aaKnown RBP17.23■□□□□ 0.35
USB1-206ENST00000562534 ZP2Q05996 745 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 GPR158Q5T848 1215 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 GPRIN1Q7Z2K8 1008 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 CCDC186Q7Z3E2 898 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 TMEM110Q86TL2 294 aa17.23■□□□□ 0.35
USB1-206ENST00000562534 SIX6OS1Q8N1H7 587 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms