RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 MTMR6Q9Y217 621 aa8.97□□□□□ -0.97
PALB2-202ENST00000561514 NME7Q9Y5B8 376 aa8.97□□□□□ -0.97
PALB2-202ENST00000561514 SPAG17Q6Q759 2223 aa8.96□□□□□ -0.97
PALB2-202ENST00000561514 FRYQ5TBA9 3013 aa8.96□□□□□ -0.97
PALB2-202ENST00000561514 LNP1A1A4G5 178 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 FAM92AA1XBS5 289 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 VPS37CA5D8V6 355 aaPredicted RBP8.96□□□□□ -0.98
PALB2-202ENST00000561514 LEFTY2O00292 366 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 TRIM66O15016 1216 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 TGFB1I1O43294 461 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 ATP2C2O75185 946 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 PRPF6O94906 941 aaKnown RBP8.96□□□□□ -0.98
PALB2-202ENST00000561514 KCNK5O95279 499 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 TNNC2P02585 160 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 KRT19P08727 400 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 IDEP14735 1019 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 HDCP19113 662 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 MSNP26038 577 aaKnown RBP8.96□□□□□ -0.98
PALB2-202ENST00000561514 STAT6P42226 847 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 SNRPFP62306 86 aaKnown RBP8.96□□□□□ -0.98
PALB2-202ENST00000561514 MRPS21P82921 87 aaKnown RBP8.96□□□□□ -0.98
PALB2-202ENST00000561514 PSMD6Q15008 389 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 CCDC6Q16204 474 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 BMT2Q1RMZ1 405 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 SNX30Q5VWJ9 437 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 LMBRD2Q68DH5 695 aaPredicted RBP8.96□□□□□ -0.98
PALB2-202ENST00000561514 TCEAL6Q6IPX3 200 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 FAM173BQ6P4H8 233 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 STXBP4Q6ZWJ1 553 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 TRAPPC11Q7Z392 1133 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 C12orf56Q8IXR9 622 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 CCDC65Q8IXS2 484 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 ADGRG2Q8IZP9 1017 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 SYCP3Q8IZU3 236 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 PHTF2Q8N3S3 785 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 TSTD1Q8NFU3 115 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 ZNF507Q8TCN5 953 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 TMEM174Q8WUU8 243 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 OVCA2Q8WZ82 227 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 TCEAL3Q969E4 200 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 PCED1BQ96HM7 432 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 ZFRQ96KR1 1074 aaKnown RBP8.96□□□□□ -0.98
PALB2-202ENST00000561514 USP28Q96RU2 1077 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 CGRRF1Q99675 332 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 XYLT2Q9H1B5 865 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 SMOC1Q9H4F8 434 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 PCIF1Q9H4Z3 704 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 VRTNQ9H8Y1 702 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 UPF2Q9HAU5 1272 aaKnown RBP8.96□□□□□ -0.98
PALB2-202ENST00000561514 TRPC7Q9HCX4 862 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 AGPAT3Q9NRZ7 376 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 IL37Q9NZH6 218 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 TRPM5Q9NZQ8 1165 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 MAGEC2Q9UBF1 373 aaPredicted RBP8.96□□□□□ -0.98
PALB2-202ENST00000561514 EVLQ9UI08 416 aaPredicted RBP8.96□□□□□ -0.98
PALB2-202ENST00000561514 UBE4BO95155 1302 aa8.96□□□□□ -0.98
PALB2-202ENST00000561514 GREB1Q4ZG55 1949 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 ZZEF1O43149 2961 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 F8VP50 259 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 SLC9A3R1O14745 358 aaPredicted RBP8.95□□□□□ -0.98
PALB2-202ENST00000561514 DCLK1O15075 740 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 CAVIN2O95810 425 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 HNRNPLP14866 589 aaKnown RBP eCLIP8.95□□□□□ -0.98
PALB2-202ENST00000561514 CSRP1P21291 193 aaKnown RBP8.95□□□□□ -0.98
PALB2-202ENST00000561514 BDNFP23560 247 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 KIR2DL1P43626 348 aaPredicted RBP8.95□□□□□ -0.98
PALB2-202ENST00000561514 TUBP50607 506 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 DGKEP52429 567 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 PSMC1P62191 440 aaKnown RBP8.95□□□□□ -0.98
PALB2-202ENST00000561514 MESP2Q0VG99 397 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 PSMD2Q13200 908 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 DHCR24Q15392 516 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 CRY1Q16526 586 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 SNRNP35Q16560 246 aaKnown RBP8.95□□□□□ -0.98
PALB2-202ENST00000561514 SPDYCQ5MJ68 293 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 PEAR1Q5VY43 1037 aaPredicted RBP8.95□□□□□ -0.98
PALB2-202ENST00000561514 RNF43Q68DV7 783 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 SCN4BQ8IWT1 228 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 LINC00301Q8NCQ3 95 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 MRPL45Q9BRJ2 306 aaKnown RBP8.95□□□□□ -0.98
PALB2-202ENST00000561514 EDEM2Q9BV94 578 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 TMEM121BQ9BXQ6 578 aaPredicted RBP8.95□□□□□ -0.98
PALB2-202ENST00000561514 LRRC27Q9C0I9 530 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 ELOVL4Q9GZR5 314 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 RNF38Q9H0F5 515 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 CACNA1GO43497 2377 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 OBSL1O75147 1896 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 ASPMQ8IZT6 3477 aa8.95□□□□□ -0.98
PALB2-202ENST00000561514 CACNA1EQ15878 2313 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 CDX4O14627 284 aaPredicted RBP8.94□□□□□ -0.98
PALB2-202ENST00000561514 HOXC11O43248 304 aaPredicted RBP8.94□□□□□ -0.98
PALB2-202ENST00000561514 PPP6R2O75170 966 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 ZDHHC11BP0C7U3 371 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 BCKDHBP21953 392 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 ANXA13P27216 316 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 ATICP31939 592 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 HOXD12P35452 270 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 P2RY2P41231 377 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 CACNA2D1P54289 1103 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 CLDN10P78369 228 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms