RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 RAG1P15918 1043 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 YWHABP31946 246 aaKnown RBP17.18■□□□□ 0.34
TPM1-228ENST00000560975 ECE1P42892 770 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 TMED1Q13445 227 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 RABGAP1LQ5R372 815 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 UGT2A3Q6UWM9 527 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 B3GNT9Q6UX72 402 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 KYAT3Q6YP21 454 aaKnown RBP17.18■□□□□ 0.34
TPM1-228ENST00000560975 GMCL1Q96IK5 515 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 CAPN8A6NHC0 703 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 TOP3BO95985 862 aaKnown RBP17.18■□□□□ 0.34
TPM1-228ENST00000560975 HLA-DRAP01903 254 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 ITGB5P18084 799 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 HPCAP84074 193 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 UGCGQ16739 394 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 ANKRD20A4Q4UJ75 823 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 ATG16L1Q676U5 607 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 AAGABQ6PD74 315 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 TMC2Q8TDI7 906 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 MFSD14AQ96MC6 490 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 C7orf26Q96N11 449 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 MMP19Q99542 508 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 CDCA7Q9BWT1 371 aaPredicted RBP17.18■□□□□ 0.34
TPM1-228ENST00000560975 GRIP2Q9C0E4 1043 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 PCDHGB4Q9UN71 923 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 PCDHGB5Q9Y5G0 923 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 COL5A3P25940 1745 aaPredicted RBP17.18■□□□□ 0.34
TPM1-228ENST00000560975 MYOCOSA0A1B0GUC4 107 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 PROCP04070 461 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 DESP17661 470 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 RGS2P41220 211 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 NPTX2P47972 431 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 SH3BGRP55822 239 aaPredicted RBP17.18■□□□□ 0.34
TPM1-228ENST00000560975 BTKQ06187 659 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 XKR9Q5GH70 373 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 SH2D4BQ5SQS7 431 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 TMEM161BQ8NDZ6 487 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 TMEM191CA6NGB0 347 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 VIL1P09327 827 aaKnown RBP17.17■□□□□ 0.34
TPM1-228ENST00000560975 TMEM191BP0C7N4 346 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 SMIM18P0DKX4 95 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 NCKAP1LP55160 1127 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 SPP2Q13103 211 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 AOC3Q16853 763 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 KLHDC10Q6PID8 442 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 TMEM179Q6ZVK1 233 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 ICA1LQ8NDH6 482 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 CEP70Q8NHQ1 597 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 TEKT1Q969V4 418 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 PICK1Q9NRD5 415 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 KCNH7Q9NS40 1196 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 PLLPQ9Y342 182 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 HBS1LQ9Y450 684 aaKnown RBP17.17■□□□□ 0.34
TPM1-228ENST00000560975 A0A0J9YVX5 310 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 CXorf49A8MYA2 514 aaPredicted RBP17.17■□□□□ 0.34
TPM1-228ENST00000560975 E7ESA3 106 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 KLF11O14901 512 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 HNRNPDLO14979 420 aaKnown RBP17.17■□□□□ 0.34
TPM1-228ENST00000560975 ATP9BO43861 1147 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 UGT1A9O60656 530 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 QARSP47897 775 aaKnown RBP17.17■□□□□ 0.34
TPM1-228ENST00000560975 GALK1P51570 392 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 MRPS5P82675 430 aaKnown RBP17.17■□□□□ 0.34
TPM1-228ENST00000560975 PRR5LQ6MZQ0 368 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 DNAJC24Q6P3W2 148 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 B3GNT6Q6ZMB0 384 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 SH3BP5LQ7L8J4 393 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 ADGRG6Q86SQ4 1221 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 PHF13Q86YI8 300 aaPredicted RBP17.17■□□□□ 0.34
TPM1-228ENST00000560975 GMCL1P1Q8NEA9 526 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 TMEM174Q8WUU8 243 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 UGT1A7Q9HAW7 530 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 UGT1A10Q9HAW8 530 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 UGT1A8Q9HAW9 530 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 USP29Q9HBJ7 922 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 KMT5AQ9NQR1 393 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 PTTG2Q9NZH5 202 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 PACSIN3Q9UKS6 424 aa17.17■□□□□ 0.34
TPM1-228ENST00000560975 LYPLA1O75608 230 aaPredicted RBP17.16■□□□□ 0.34
TPM1-228ENST00000560975 TOM1L1O75674 476 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 CLPTM1O96005 669 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 SERPINA6P08185 405 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 STAT2P52630 851 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 WNT7BP56706 349 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 NADK2Q4G0N4 442 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 PAOXQ6QHF9 649 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 USP37Q86T82 979 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 HPS6Q86YV9 775 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 PRICKLE1Q96MT3 831 aaPredicted RBP17.16■□□□□ 0.34
TPM1-228ENST00000560975 INPP5FQ9Y2H2 1132 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 LOC100653049A0A140TA62 436 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 SPDYE16A6NNV3 312 aaPredicted RBP17.16■□□□□ 0.34
TPM1-228ENST00000560975 ZMPSTE24O75844 475 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 KRT34O76011 436 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 IL1BP01584 269 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 TLR1Q15399 786 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 RSPH3Q86UC2 560 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 MAP4K3Q8IVH8 894 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 PPP1R14CQ8TAE6 165 aa17.16■□□□□ 0.34
TPM1-228ENST00000560975 BSNDQ8WZ55 320 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms