RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 ARHGAP26Q9UNA1 814 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 MYO18AQ92614 2054 aaKnown RBP11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 PLXND1Q9Y4D7 1925 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 SLC9A3R1O14745 358 aaPredicted RBP11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 ZBTB24O43167 697 aaPredicted RBP11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 ATP2C2O75185 946 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 ADH1CP00326 375 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 TNNC2P02585 160 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 CYP17A1P05093 508 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 PDGFRBP09619 1106 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 IDEP14735 1019 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 GJB2P29033 226 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 LONP1P36776 959 aaKnown RBP11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 PTGER3P43115 390 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 WNT7BP56706 349 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 CFAP221Q4G0U5 840 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 DENND5BQ6ZUT9 1274 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 HS2ST1Q7LGA3 356 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 SYT12Q8IV01 421 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 BRSK2Q8IWQ3 736 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 DEFB119Q8N690 84 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 FRMD1Q8N878 549 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 ZSWIM2Q8NEG5 633 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 LRRC15Q8TF66 581 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 GATA6Q92908 595 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 FUBP3Q96I24 572 aaKnown RBP eCLIP11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 FIZ1Q96SL8 496 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 PCIF1Q9H4Z3 704 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 FSCN3Q9NQT6 498 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 EHD2Q9NZN4 543 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 CFAP97Q9P2B7 532 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 EVLQ9UI08 416 aaPredicted RBP11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 KLK13Q9UKR3 277 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 CPQQ9Y646 472 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 STYXL1Q9Y6J8 313 aa11.21□□□□□ -0.61
CDC42BPB-207ENST00000560492 ATRXP46100 2492 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 GON4LQ3T8J9 2241 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 AKAP13Q12802 2813 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 SGK1O00141 431 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 TNFRSF10BO14763 440 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 TRIM66O15016 1216 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 KAT7O95251 611 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 BMP15O95972 392 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 MBL2P11226 248 aaPredicted RBP11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 ADH5P11766 374 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 ADSSP30520 456 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 TXLNAP40222 546 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 P2RY2P41231 377 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 DPP6P42658 865 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 MAGEA11P43364 429 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 SLC6A11P48066 632 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 POU5F1Q01860 360 aaKnown RBP11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 RPL6Q02878 288 aaKnown RBP11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 GRIN1Q05586 938 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 GFPT1Q06210 699 aaPredicted RBP11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 RING1Q06587 406 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 KCNA1Q09470 495 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 DHCR24Q15392 516 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 MAPRE1Q15691 268 aaKnown RBP11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 L1TD1Q5T7N2 865 aaKnown RBP11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 EMC10Q5UCC4 262 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 BTBD8Q5XKL5 378 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 ZNF720Q7Z2F6 126 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 SFTPA1Q8IWL2 248 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 TOP6BLQ8N6T0 577 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 IL17RCQ8NAC3 791 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 ERLEC1Q96DZ1 483 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 HPDLQ96IR7 371 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 ST6GALNAC4Q9H4F1 302 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 PDE11AQ9HCR9 933 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 GDAP2Q9NXN4 497 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 CCDC39Q9UFE4 941 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 CDH9Q9ULB4 789 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 SMC3Q9UQE7 1217 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 NEUROG3Q9Y4Z2 214 aa11.2□□□□□ -0.62
CDC42BPB-207ENST00000560492 ZZEF1O43149 2961 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 SPEGQ15772 3267 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 TBC1D3BA6NDS4 549 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 AP5Z1O43299 807 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 OPHN1O60890 802 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 PRPF6O94906 941 aaKnown RBP11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 HNRNPLP14866 589 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 GAP43P17677 238 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 ITPKAP23677 461 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 WASP42768 502 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 USP46P62068 366 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 DUOXA1Q1HG43 343 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 SOWAHAQ2M3V2 549 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 MDH1BQ5I0G3 518 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 TDRD10Q5VZ19 366 aaKnown RBP11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 VSTM1Q6UX27 236 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 DDX42Q86XP3 938 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 NAT16Q8N8M0 369 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 SLITRK1Q96PX8 696 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 FNBP1Q96RU3 617 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 PKMYT1Q99640 499 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 NACA2Q9H009 215 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 SNX25Q9H3E2 840 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 TMEM74BQ9NUR3 256 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms