RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 BST2Q10589 180 aaKnown RBP11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 TRIM32Q13049 653 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 LRRC14Q15048 493 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 BMT2Q1RMZ1 405 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 CFAP157Q5JU67 520 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 ARHGAP18Q8N392 663 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 EDEM1Q92611 657 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 SH3GL3Q99963 347 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 EIF2AQ9BY44 585 aaKnown RBP11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 PITPNM3Q9BZ71 974 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 BATF3Q9NR55 127 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 COL2A1P02458 1487 aaPredicted RBP11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 SMIM28A0A1B0GU29 152 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 GOLGA8MH3BSY2 632 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 APOL1O14791 398 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 ACRP10323 421 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 MBL2P11226 248 aaPredicted RBP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 GZMAP12544 262 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 ZFXP17010 805 aaPredicted RBP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 RAD51Q06609 339 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 ZNF235Q14590 738 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 FAM131BQ86XD5 332 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 KIRREL3Q8IZU9 778 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 PABPC5Q96DU9 382 aaKnown RBP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 PACSIN1Q9BY11 444 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 LACRTQ9GZZ8 138 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 ETNK1Q9HBU6 452 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 VCX3AQ9NNX9 186 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 GTF2IRD1Q9UHL9 959 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 LAMA4Q16363 1823 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 ARAP2Q8WZ64 1704 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 EEF2KO00418 725 aaKnown RBP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 TSPAN1O60635 241 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 CRCPO75575 148 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 INHBAP08476 426 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 SETSIPP0DME0 302 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 EIF3EP60228 445 aaKnown RBP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 PTK7Q13308 1070 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 ZBTB41Q5SVQ8 909 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 IL31Q6EBC2 164 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 RCOR2Q8IZ40 523 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 SPATA20Q8TB22 786 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 GIPC2Q8TF65 315 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 ZNF518BQ9C0D4 1074 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 ECT2Q9H8V3 914 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 MRPL17Q9NRX2 175 aaKnown RBP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 DPP7Q9UHL4 492 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 DDX60Q8IY21 1712 aaKnown RBP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 SF3B1O75533 1304 aaKnown RBP eCLIP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 KIF3CO14782 793 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 CALCAP01258 141 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 AVPR1AP37288 418 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 NUMBP49757 651 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 PURAQ00577 322 aaKnown RBP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 TBX2Q13207 712 aaPredicted RBP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 TUSC3Q13454 348 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 GDF6Q6KF10 455 aaPredicted RBP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 KDELC2Q7Z4H8 507 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 SCUBE3Q8IX30 993 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 NDUFAF2Q8N183 169 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 SLC12A8A0AV02 714 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 CCDC130P13994 396 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 PTPN1P18031 435 aaKnown RBP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 PMS2P54278 862 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 THOC5Q13769 683 aaKnown RBP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 TMED2Q15363 201 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 BOLA3Q53S33 107 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 KCNT1Q5JUK3 1230 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 SH2D4BQ5SQS7 431 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 ZNF618Q5T7W0 954 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 TSHZ1Q6ZSZ6 1077 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 IFT43Q96FT9 208 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 RPRD1AQ96P16 312 aaPredicted RBP11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 EMILIN2Q9BXX0 1053 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 SMPD4Q9NXE4 827 aa11.11□□□□□ -0.63
CARMIL3-202ENST00000559694 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 ADIGQ0VDE8 80 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 PAPD7Q5XG87 772 aaKnown RBP11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 TAPT1Q6NXT6 567 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 TMEM86AQ8N2M4 240 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 PYROXD1Q8WU10 500 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 CCT6BQ92526 530 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 OSBPL8Q9BZF1 889 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 PGAP2Q9UHJ9 254 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 ADAMTS5Q9UNA0 930 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 CST8O60676 142 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 SYN1P17600 705 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 NFKBIAP25963 317 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 MSH2P43246 934 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 TUFMP49411 452 aaKnown RBP11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 ROR1Q01973 937 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 GRIK3Q13003 919 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 GPS1Q13098 491 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 CCDC137Q6PK04 289 aaKnown RBP11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 KDM7AQ6ZMT4 941 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 DDX42Q86XP3 938 aaKnown RBP eCLIP11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 USP33Q8TEY7 942 aa11.1□□□□□ -0.63
CARMIL3-202ENST00000559694 RXFP2Q8WXD0 754 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms