RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 PCK1P35558 622 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 CTCFP49711 727 aaPredicted RBP11.57□□□□□ -0.56
SPG11-217ENST00000559511 CPT1AP50416 773 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 SF3A3Q12874 501 aaKnown RBP eCLIP11.57□□□□□ -0.563e-6■□□□□ 9.9
SPG11-217ENST00000559511 ZBTB6Q15916 424 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 CDO1Q16878 200 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 PKDCCQ504Y2 493 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 PMF1Q6P1K2 205 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 SLC27A1Q6PCB7 646 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 CATSPER4Q7RTX7 472 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 PACS2Q86VP3 889 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 TTC30AQ86WT1 665 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 UNC45BQ8IWX7 931 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 ZBED8Q8IZ13 594 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 TTC13Q8NBP0 860 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 DNAJB3Q8WWF6 145 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 CPT1BQ92523 772 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 CFAP57Q96MR6 1250 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 ZIC5Q96T25 663 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 LPIN3Q9BQK8 851 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 CNPY3Q9BT09 278 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 OSBPL7Q9BZF2 842 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 AP5M1Q9H0R1 490 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 FAM124BQ9H5Z6 455 aaPredicted RBP11.57□□□□□ -0.56
SPG11-217ENST00000559511 KCNK9Q9NPC2 374 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.57□□□□□ -0.56
SPG11-217ENST00000559511 FAM49BQ9NUQ9 324 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 KIAA1257Q9ULG3 409 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 Q9Y3F1 56 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 SCN10AQ9Y5Y9 1956 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 EXOC1LA0A1B0GW35 172 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 APOC4-APOC2K7ER74 178 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 TREHO43280 583 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 HCRTO43612 131 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 ENDOD1O94919 500 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 APOC2P02655 101 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 VIMP08670 466 aaKnown RBP11.57□□□□□ -0.56
SPG11-217ENST00000559511 PDGFRAP16234 1089 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 RPL22P35268 128 aaKnown RBP11.57□□□□□ -0.56
SPG11-217ENST00000559511 NRLP54845 237 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 ZNF200P98182 395 aaPredicted RBP11.57□□□□□ -0.56
SPG11-217ENST00000559511 CDC42EP1Q00587 391 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 ADCY1Q08828 1119 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 PDIA2Q13087 525 aaKnown RBP11.57□□□□□ -0.56
SPG11-217ENST00000559511 TMED2Q15363 201 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 NPNTQ6UXI9 565 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 CAPN12Q6ZSI9 719 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 PIGWQ7Z7B1 504 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 SRRM1Q8IYB3 904 aaKnown RBP11.57□□□□□ -0.56
SPG11-217ENST00000559511 TTC39CQ8N584 583 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 TAB3Q8N5C8 712 aaPredicted RBP11.57□□□□□ -0.56
SPG11-217ENST00000559511 ANKRD42Q8N9B4 389 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 MAML1Q92585 1016 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 TTC25Q96NG3 672 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 CCDC77Q9BR77 488 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 FRMD8P1Q9BZ68 369 aaPredicted RBP11.57□□□□□ -0.56
SPG11-217ENST00000559511 NXF3Q9H4D5 531 aaKnown RBP11.57□□□□□ -0.56
SPG11-217ENST00000559511 PLEKHA5Q9HAU0 1116 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 DERAQ9Y315 318 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 TLL2Q9Y6L7 1015 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 TCRBV7S3A2A0A539 114 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 ALOX15BO15296 676 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 GABBR2O75899 941 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 FSBPO95073 299 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 DARSP14868 501 aaKnown RBP11.56□□□□□ -0.56
SPG11-217ENST00000559511 CDH6P55285 790 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 EIF3EP60228 445 aaKnown RBP11.56□□□□□ -0.56
SPG11-217ENST00000559511 ATP11AP98196 1134 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 DPYSL3Q14195 570 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 HIF1AQ16665 826 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 CCDC14Q49A88 953 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 MSS51Q4VC12 460 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 FNBP1LQ5T0N5 605 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 NOTUMQ6P988 496 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 OLFML1Q6UWY5 402 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 ALKAL1Q6UXT8 129 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 CENPUQ71F23 418 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 ANKMY2Q8IV38 441 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 CCDC13Q8IYE1 715 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 NAT8LQ8N9F0 302 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 FAM71DQ8N9W8 422 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 TRPV1Q8NER1 839 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 DYDC1Q8WWB3 177 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 RSAD2Q8WXG1 361 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 DPEP3Q9H4B8 488 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 RSAD1Q9HA92 442 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 CEP350Q5VT06 3117 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 CASP8AP2Q9UKL3 1982 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 RECQL4O94761 1208 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 AKAP5P24588 427 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 PURAQ00577 322 aaKnown RBP11.56□□□□□ -0.56
SPG11-217ENST00000559511 SREBF2Q12772 1141 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 FSCN1Q16658 493 aaKnown RBP11.56□□□□□ -0.56
SPG11-217ENST00000559511 FAM182AQ5T1J6 154 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 CCDC121Q6ZUS5 278 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 PCGF5Q86SE9 256 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 SCUBE3Q8IX30 993 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 PPIL6Q8IXY8 311 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 CCDC197Q8NCU1 140 aa11.56□□□□□ -0.56
SPG11-217ENST00000559511 GDAP1Q8TB36 358 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms