RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ZNF157P51786 506 aaPredicted RBP11.8□□□□□ -0.52
CLPX-204ENST00000559152 BCAT1P54687 386 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 CDH6P55285 790 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 EIF3EP60228 445 aaKnown RBP11.8□□□□□ -0.52
CLPX-204ENST00000559152 BST2Q10589 180 aaKnown RBP11.8□□□□□ -0.52
CLPX-204ENST00000559152 KRT81Q14533 505 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 SOWAHAQ2M3V2 549 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 UBAP2Q5T6F2 1119 aaKnown RBP11.8□□□□□ -0.52
CLPX-204ENST00000559152 PMF1Q6P1K2 205 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 TTC30AQ86WT1 665 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 ANKRD52Q8NB46 1076 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 APPL2Q8NEU8 664 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 MDM1Q8TC05 714 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 C18orf25Q96B23 403 aaPredicted RBP11.8□□□□□ -0.52
CLPX-204ENST00000559152 TNIP3Q96KP6 325 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 C9orf72Q96LT7 481 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLPX-204ENST00000559152 FLRT1Q9NZU1 646 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
CLPX-204ENST00000559152 HES2Q9Y543 173 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 MGAMO43451 1857 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 RALGAPA2Q2PPJ7 1873 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 TREHO43280 583 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 TOMM70O94826 608 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 TGM2P21980 687 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 PHBP35232 272 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 RGS7P49802 495 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 ARL4CP56559 192 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 SLC8A3P57103 927 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 RASA2Q15283 850 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 FSCN1Q16658 493 aaKnown RBP11.8□□□□□ -0.52
CLPX-204ENST00000559152 HIF1AQ16665 826 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 CCDC14Q49A88 953 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 CST9Q5W186 159 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 C17orf99Q6UX52 265 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 TDRPQ86YL5 185 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 GLIS1Q8NBF1 620 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 SPATA18Q8TC71 538 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 ATXN2LQ8WWM7 1075 aaKnown RBP11.8□□□□□ -0.52
CLPX-204ENST00000559152 PRCCQ92733 491 aaPredicted RBP11.8□□□□□ -0.52
CLPX-204ENST00000559152 HSFY1Q96LI6 401 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 NSRP1Q9H0G5 558 aaKnown RBP11.8□□□□□ -0.52
CLPX-204ENST00000559152 KAT6AQ92794 2004 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.79□□□□□ -0.52
CLPX-204ENST00000559152 CFAP69A5D8W1 941 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 M0QZ92 97 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 IGF2BP3O00425 579 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLPX-204ENST00000559152 MDM4O15151 490 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 HUS1O60921 280 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 RPLP2P05387 115 aaKnown RBP11.79□□□□□ -0.52
CLPX-204ENST00000559152 CD48P09326 243 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 RBP3P10745 1247 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 AKR1A1P14550 325 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 ETS1P14921 441 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 TSHRP16473 764 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 CYP2B6P20813 491 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 AKAP5P24588 427 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 HOXC8P31273 242 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 MAGEA9P43362 315 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 PTPN9P43378 593 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 CTCFP49711 727 aaPredicted RBP11.79□□□□□ -0.52
CLPX-204ENST00000559152 ROR1Q01973 937 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 PDE4CQ08493 712 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 NOMO1Q15155 1222 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 CCDC142Q17RM4 750 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 GLRA4Q5JXX5 417 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 TADA2BQ86TJ2 420 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 PRUNE1Q86TP1 453 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 RASAL3Q86YV0 1011 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 HACE1Q8IYU2 909 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 CACNA2D3Q8IZS8 1091 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 OTUD6BQ8N6M0 293 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 TOP6BLQ8N6T0 577 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 PWWP2AQ96N64 755 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 RNF157Q96PX1 679 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 APOL6Q9BWW8 343 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 UBN1Q9NPG3 1134 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 FAM49BQ9NUQ9 324 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 FETUBQ9UGM5 382 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 CITO14578 2027 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 EXOC1LA0A1B0GW35 172 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 PPEF2O14830 753 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 ZFXP17010 805 aaPredicted RBP11.79□□□□□ -0.52
CLPX-204ENST00000559152 RPL34P49207 117 aaKnown RBP11.79□□□□□ -0.52
CLPX-204ENST00000559152 DPYSL3Q14195 570 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 UBXN11Q5T124 520 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 CYP4F22Q6NT55 531 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 SCYL2Q6P3W7 929 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 C4orf22Q6V702 233 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 PPP1R21Q6ZMI0 780 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 ARHGEF18Q6ZSZ5 1173 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 SLC26A9Q7LBE3 791 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 RSPH3Q86UC2 560 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 SCUBE3Q8IX30 993 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 ANKS4BQ8N8V4 417 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 NAT8LQ8N9F0 302 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 FAM172AQ8WUF8 416 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 TMEM40Q8WWA1 233 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 DYDC1Q8WWB3 177 aa11.79□□□□□ -0.52
CLPX-204ENST00000559152 PPM1EQ8WY54 764 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms