RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 USP4Q13107 963 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 SNX30Q5VWJ9 437 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 FOXR2Q6PJQ5 311 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 TXNDC11Q6PKC3 985 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 TTC8Q8TAM2 541 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 RIN3Q8TB24 985 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 SLC2A14Q8TDB8 520 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 SH3RF2Q8TEC5 729 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 NELL1Q92832 810 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 ERCC4Q92889 916 aaPredicted RBP18.67■□□□□ 0.58
SMAD3-210ENST00000559092 EXOC4Q96A65 974 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 HNRNPABQ99729 332 aaKnown RBP18.67■□□□□ 0.58
SMAD3-210ENST00000559092 EBF3Q9H4W6 596 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 MMRN2Q9H8L6 949 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 DUS2Q9NX74 493 aaKnown RBP18.67■□□□□ 0.58
SMAD3-210ENST00000559092 MAN1B1Q9UKM7 699 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 PCDHGA2Q9Y5H1 932 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 FAM92AA1XBS5 289 aa18.66■□□□□ 0.58
SMAD3-210ENST00000559092 CILPO75339 1184 aa18.66■□□□□ 0.58
SMAD3-210ENST00000559092 OLFM2O95897 454 aa18.66■□□□□ 0.58
SMAD3-210ENST00000559092 OAS1P00973 400 aaKnown RBP18.66■□□□□ 0.58
SMAD3-210ENST00000559092 CCR3P51677 355 aa18.66■□□□□ 0.58
SMAD3-210ENST00000559092 WDR44Q5JSH3 913 aa18.66■□□□□ 0.58
SMAD3-210ENST00000559092 SPEM1Q8N4L4 309 aa18.66■□□□□ 0.58
SMAD3-210ENST00000559092 ATP2A3Q93084 1043 aa18.66■□□□□ 0.58
SMAD3-210ENST00000559092 SMOQ99835 787 aa18.66■□□□□ 0.58
SMAD3-210ENST00000559092 METTL14Q9HCE5 456 aaKnown RBP18.66■□□□□ 0.58
SMAD3-210ENST00000559092 KRT82Q9NSB4 513 aa18.66■□□□□ 0.58
SMAD3-210ENST00000559092 ZSCAN32Q9NX65 697 aa18.66■□□□□ 0.58
SMAD3-210ENST00000559092 HMGXB4Q9UGU5 601 aa18.66■□□□□ 0.58
SMAD3-210ENST00000559092 ARMCX3Q9UH62 379 aaPredicted RBP18.66■□□□□ 0.58
SMAD3-210ENST00000559092 COQ4Q9Y3A0 265 aa18.66■□□□□ 0.58
SMAD3-210ENST00000559092 COL4A3Q01955 1670 aa18.66■□□□□ 0.58
SMAD3-210ENST00000559092 OTOL1A6NHN0 477 aaPredicted RBP18.65■□□□□ 0.58
SMAD3-210ENST00000559092 TRDMT1O14717 391 aaKnown RBP18.65■□□□□ 0.58
SMAD3-210ENST00000559092 GADD45BO75293 160 aaPredicted RBP18.65■□□□□ 0.58
SMAD3-210ENST00000559092 ABL1P00519 1130 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 LMNAP02545 664 aaKnown RBP18.65■□□□□ 0.58
SMAD3-210ENST00000559092 PMS1P54277 932 aaKnown RBP18.65■□□□□ 0.58
SMAD3-210ENST00000559092 NRLP54845 237 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 GRSF1Q12849 480 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMAD3-210ENST00000559092 NR1H3Q13133 447 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 CCINQ13939 588 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 PON2Q15165 354 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 TRIM68Q6AZZ1 485 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 FILIP1Q7Z7B0 1213 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 CPA6Q8N4T0 437 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 C12orf29Q8N999 325 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 ATRIPQ8WXE1 791 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 SEMA4DQ92854 862 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 FBXO32Q969P5 355 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 CYFIP2Q96F07 1278 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 CEP63Q96MT8 703 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 RNF38Q9H0F5 515 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 FBXO44Q9H4M3 255 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 ECT2Q9H8V3 914 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.65■□□□□ 0.582e-7■■■■■ 33.6
SMAD3-210ENST00000559092 R4GN57 208 aa18.65■□□□□ 0.58
SMAD3-210ENST00000559092 LEFTY2O00292 366 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 PAPSS2O95340 614 aaPredicted RBP18.64■□□□□ 0.57
SMAD3-210ENST00000559092 FAM200BP0CF97 657 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 CCDC130P13994 396 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 ARSAP15289 507 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 CXCL12P48061 93 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 IFNAR2P48551 515 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 TUBP50607 506 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 SLC5A3P53794 718 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 ORC1Q13415 861 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 MORC3Q14149 939 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 TMEM196Q5HYL7 178 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 TCERG1LQ5VWI1 586 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 DDX42Q86XP3 938 aaKnown RBP eCLIP18.64■□□□□ 0.57
SMAD3-210ENST00000559092 ZBTB44Q8NCP5 570 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 ZMIZ2Q8NF64 920 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 SCAMP5Q8TAC9 235 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 WHAMMQ8TF30 809 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 TWNKQ96RR1 684 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 PNPLA8Q9NP80 782 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 CHMP5Q9NZZ3 219 aa18.64■□□□□ 0.57
SMAD3-210ENST00000559092 TRIM49BA6NDI0 452 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 SLC9A3R1O14745 358 aaPredicted RBP18.63■□□□□ 0.57
SMAD3-210ENST00000559092 PMM2O15305 246 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 ZDHHC11BP0C7U3 371 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 CD58P19256 250 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 MAP3K7CLP57077 242 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 UBE2HP62256 183 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 GAS6Q14393 721 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 EML3Q32P44 896 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 DCAF17Q5H9S7 520 aaPredicted RBP18.63■□□□□ 0.57
SMAD3-210ENST00000559092 HECTD3Q5T447 861 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 SLC35C1Q96A29 364 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 CISHQ9NSE2 258 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 FAM49BQ9NUQ9 324 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 CHORDC1Q9UHD1 332 aaPredicted RBP18.63■□□□□ 0.57
SMAD3-210ENST00000559092 WNT6Q9Y6F9 365 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 RIF1Q5UIP0 2472 aaKnown RBP18.63■□□□□ 0.57
SMAD3-210ENST00000559092 COL4A2P08572 1712 aa18.63■□□□□ 0.57
SMAD3-210ENST00000559092 NUP210Q8TEM1 1887 aaPredicted RBP18.63■□□□□ 0.57
SMAD3-210ENST00000559092 BICDL2A1A5D9 508 aa18.62■□□□□ 0.57
SMAD3-210ENST00000559092 PPP1R3GB7ZBB8 358 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms