RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 VSTM1Q6UX27 236 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 Q6ZS52 159 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 TRAPPC11Q7Z392 1133 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 TMEM150AQ86TG1 271 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 MON1AQ86VX9 555 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 NELFCDQ8IXH7 590 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 C12orf56Q8IXR9 622 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 SYNPOQ8N3V7 929 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 CPA6Q8N4T0 437 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 TTC8Q8TAM2 541 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 ZNF507Q8TCN5 953 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 SCFD1Q8WVM8 642 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 KBTBD7Q8WVZ9 684 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 USP13Q92995 863 aaPredicted RBP8.61□□□□□ -1.03
TRAF3-205ENST00000558700 MYLPFQ96A32 169 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 EXOC4Q96A65 974 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 MYRFLQ96LU7 910 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 CEP295NLQ96MC4 621 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 MMS19Q96T76 1030 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 SLC46A2Q9BY10 475 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 BLZF1Q9H2G9 400 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 TRPC7Q9HCX4 862 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 RBM12Q9NTZ6 932 aaKnown RBP8.61□□□□□ -1.03
TRAF3-205ENST00000558700 TDP1Q9NUW8 608 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 EHD2Q9NZN4 543 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 MAGEC2Q9UBF1 373 aaPredicted RBP8.61□□□□□ -1.03
TRAF3-205ENST00000558700 GTF3C4Q9UKN8 822 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 CDV3Q9UKY7 258 aaKnown RBP8.61□□□□□ -1.03
TRAF3-205ENST00000558700 PCDHA7Q9UN72 937 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 MYO15AQ9UKN7 3530 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 ATP8B3O60423 1300 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 MYO16Q9Y6X6 1858 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 CLIC2O15247 247 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 EXOC3O60645 756 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 TACC1O75410 805 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 STAU1O95793 577 aaKnown RBP8.6□□□□□ -1.03
TRAF3-205ENST00000558700 PFKLP17858 780 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 AFMP43652 599 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 IFNAR2P48551 515 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 CYP27A1Q02318 531 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 LMNB2Q03252 620 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 GRSF1Q12849 480 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRAF3-205ENST00000558700 TRPC3Q13507 836 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 RUNX3Q13761 415 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 CCINQ13939 588 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 MTF1Q14872 753 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 KNOP1Q1ED39 458 aaKnown RBP8.6□□□□□ -1.03
TRAF3-205ENST00000558700 TXNDC8Q6A555 127 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 LAIR1Q6GTX8 287 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 FAM171BQ6P995 826 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 NYAP1Q6ZVC0 841 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 LIMS2Q7Z4I7 341 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 MYCBPAPQ8TBZ2 947 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 ATP2A3Q93084 1043 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 SYAP1Q96A49 352 aaPredicted RBP8.6□□□□□ -1.03
TRAF3-205ENST00000558700 CCDC127Q96BQ5 260 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 SPATA17Q96L03 361 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 LRRC3BQ96PB8 259 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 ELOVL4Q9GZR5 314 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 SNX25Q9H3E2 840 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 SLC39A2Q9NP94 309 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 HPS4Q9NQG7 708 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 CCL26Q9Y258 94 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 PCDHB11Q9Y5F2 797 aa8.6□□□□□ -1.03
TRAF3-205ENST00000558700 CACNA1AO00555 2505 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 HCRTO43612 131 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 ICMTO60725 284 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 PHACTR2O75167 634 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 ATP2C2O75185 946 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 MYL1P05976 194 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 FAM163BP0C2L3 166 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 SLFN14P0C7P3 912 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 TCF3P15923 654 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 SDHBP21912 280 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 CASP1P29466 404 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 ATICP31939 592 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 CNR2P34972 360 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 GRIK1P39086 918 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 AP3M2P53677 418 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 DNM1Q05193 864 aaKnown RBP8.59□□□□□ -1.03
TRAF3-205ENST00000558700 BIRC3Q13489 604 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 CUL4BQ13620 913 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 GAS6Q14393 721 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 PUM1Q14671 1186 aaKnown RBP eCLIP8.59□□□□□ -1.03
TRAF3-205ENST00000558700 ZNF77Q15935 545 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 ZNF699Q32M78 642 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 WDR72Q3MJ13 1102 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 TMEM196Q5HYL7 178 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 MDH1BQ5I0G3 518 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 TRIM68Q6AZZ1 485 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 PRR23BQ6ZRT6 265 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 DENND5BQ6ZUT9 1274 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.59□□□□□ -1.03
TRAF3-205ENST00000558700 LONP2Q86WA8 852 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 DCLK2Q8N568 766 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 OR6B3Q8NGW1 331 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 OSCP1Q8WVF1 389 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 RMDN1Q96DB5 314 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 PCED1BQ96HM7 432 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 FAM83CQ9BQN1 747 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms