RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 VDRP11473 427 aa16.1■□□□□ 0.17
AP4E1-202ENST00000558439 POLE2P56282 527 aa16.1■□□□□ 0.17
AP4E1-202ENST00000558439 DSTYKQ6XUX3 929 aa16.1■□□□□ 0.17
AP4E1-202ENST00000558439 DENND5BQ6ZUT9 1274 aa16.1■□□□□ 0.17
AP4E1-202ENST00000558439 TRABD2AQ86V40 505 aa16.1■□□□□ 0.17
AP4E1-202ENST00000558439 TFAP2BQ92481 460 aa16.1■□□□□ 0.17
AP4E1-202ENST00000558439 NSL1Q96IY1 281 aa16.1■□□□□ 0.17
AP4E1-202ENST00000558439 NTPCRQ9BSD7 190 aaKnown RBP16.1■□□□□ 0.17
AP4E1-202ENST00000558439 VNN1O95497 513 aa16.1■□□□□ 0.17
AP4E1-202ENST00000558439 BZW1Q7L1Q6 419 aaKnown RBP16.1■□□□□ 0.17
AP4E1-202ENST00000558439 MCUQ8NE86 351 aa16.1■□□□□ 0.17
AP4E1-202ENST00000558439 GCOM2Q9BZD3 368 aaPredicted RBP16.1■□□□□ 0.17
AP4E1-202ENST00000558439 WWP1Q9H0M0 922 aa16.1■□□□□ 0.17
AP4E1-202ENST00000558439 SCOCQ9UIL1 159 aa16.1■□□□□ 0.17
AP4E1-202ENST00000558439 RBL1P28749 1068 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 SULT1E1P49888 294 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 DPYSL3Q14195 570 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 CYP1B1Q16678 543 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 GRAMD1BQ3KR37 738 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 TTC39BQ5VTQ0 682 aaPredicted RBP16.09■□□□□ 0.17
AP4E1-202ENST00000558439 AFG1LQ8WV93 481 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 ASB14A6NK59 587 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 CD48P09326 243 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 SERPINB3P29508 390 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 OAZ1P54368 228 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 C12orf29Q8N999 325 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 ACO2Q99798 780 aaKnown RBP16.09■□□□□ 0.17
AP4E1-202ENST00000558439 TAC1P20366 129 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 SLC1A5Q15758 541 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 RSPH3Q86UC2 560 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 TMEM120AQ9BXJ8 343 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 PPCSQ9HAB8 311 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 BFARQ9NZS9 450 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 PAPPAQ13219 1627 aa16.09■□□□□ 0.17
AP4E1-202ENST00000558439 HMGCRP04035 888 aa16.08■□□□□ 0.17
AP4E1-202ENST00000558439 PAEPP09466 180 aa16.08■□□□□ 0.17
AP4E1-202ENST00000558439 SP2Q02086 613 aa16.08■□□□□ 0.17
AP4E1-202ENST00000558439 ACCSLQ4AC99 568 aa16.08■□□□□ 0.17
AP4E1-202ENST00000558439 VSTM1Q6UX27 236 aa16.08■□□□□ 0.17
AP4E1-202ENST00000558439 CCNYL1Q8N7R7 359 aa16.08■□□□□ 0.17
AP4E1-202ENST00000558439 SLC26A7Q8TE54 656 aa16.08■□□□□ 0.17
AP4E1-202ENST00000558439 ZNF317Q96PQ6 595 aaPredicted RBP16.08■□□□□ 0.17
AP4E1-202ENST00000558439 CPXM1Q96SM3 734 aa16.08■□□□□ 0.17
AP4E1-202ENST00000558439 TJP2Q9UDY2 1190 aa16.08■□□□□ 0.17
AP4E1-202ENST00000558439 ZNF541Q9H0D2 1346 aa16.08■□□□□ 0.17
AP4E1-202ENST00000558439 SIGLEC16A6NMB1 481 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 DDNO94850 711 aaPredicted RBP16.08■□□□□ 0.16
AP4E1-202ENST00000558439 CYP1A1P04798 512 aaPredicted RBP16.08■□□□□ 0.16
AP4E1-202ENST00000558439 XRCC4Q13426 336 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 THOC5Q13769 683 aaKnown RBP16.08■□□□□ 0.16
AP4E1-202ENST00000558439 ZCCHC23Q6ZST2 131 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.08■□□□□ 0.16
AP4E1-202ENST00000558439 PRPF39Q86UA1 669 aaKnown RBP16.08■□□□□ 0.16
AP4E1-202ENST00000558439 RASSF3Q86WH2 238 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 TRPM4Q8TD43 1214 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 USP33Q8TEY7 942 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 MTO1Q9Y2Z2 717 aaKnown RBP16.08■□□□□ 0.16
AP4E1-202ENST00000558439 CNTNAP1P78357 1384 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 DDX60Q8IY21 1712 aaKnown RBP16.08■□□□□ 0.16
AP4E1-202ENST00000558439 RTP1P59025 263 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 VGLL4Q14135 290 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 RCN1Q15293 331 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 TAF5Q15542 800 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 TREML2Q5T2D2 321 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 ANKRD22Q5VYY1 191 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 MOB2Q70IA6 237 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 VCX3BQ9H321 246 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 MAGEB2O15479 319 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 LMNAP02545 664 aaKnown RBP16.08■□□□□ 0.16
AP4E1-202ENST00000558439 MYL3P08590 195 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 SPRED3Q2MJR0 410 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 RGS9BPQ6ZS82 235 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 SLC26A11Q86WA9 606 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 C12orf50Q8NA57 414 aaPredicted RBP16.08■□□□□ 0.16
AP4E1-202ENST00000558439 CDT1Q9H211 546 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 TMEM134Q9H6X4 195 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 ZNF214Q9UL59 606 aaPredicted RBP16.08■□□□□ 0.16
AP4E1-202ENST00000558439 STAP1Q9ULZ2 295 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 BCORQ6W2J9 1755 aa16.08■□□□□ 0.16
AP4E1-202ENST00000558439 ADM5C9JUS6 153 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 TGFB3P10600 412 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 PRPSAP1Q14558 356 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 ZNF268Q14587 947 aaPredicted RBP16.07■□□□□ 0.16
AP4E1-202ENST00000558439 EFHC2Q5JST6 749 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 ECHDC2Q86YB7 292 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 DDX1Q92499 740 aaKnown RBP16.07■□□□□ 0.16
AP4E1-202ENST00000558439 APOL2Q9BQE5 337 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 DHX33Q9H6R0 707 aaKnown RBP16.07■□□□□ 0.16
AP4E1-202ENST00000558439 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.07■□□□□ 0.16
AP4E1-202ENST00000558439 ANGPTL2Q9UKU9 493 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 SUFUQ9UMX1 484 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 HES2Q9Y543 173 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 PTPRJQ12913 1337 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 KAT6AQ92794 2004 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 NEMP1O14524 444 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 MAFO75444 373 aaPredicted RBP16.07■□□□□ 0.16
AP4E1-202ENST00000558439 GPC4O75487 556 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 HACE1Q8IYU2 909 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 REPS2Q8NFH8 660 aa16.07■□□□□ 0.16
AP4E1-202ENST00000558439 OR6J1Q8NGC5 347 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms