RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 NCALDP61601 193 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 ABRAXAS1Q6UWZ7 409 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 ATG14Q6ZNE5 492 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 FBXW8Q8N3Y1 598 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 DCAF4Q8WV16 495 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 TEX13BQ9BXU2 312 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 KIAA1683Q9H0B3 1180 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 KRT84Q9NSB2 600 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 GPC6Q9Y625 555 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 V9GYQ6 96 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 CDK12Q9NYV4 1490 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 UBA6A0AVT1 1052 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 DPPA5A6NC42 116 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 KLHL33A6NCF5 533 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 BTN3A3O00478 584 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 SNAP91O60641 907 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 TRMUO75648 421 aaKnown RBP12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 KCNA6P17658 529 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 ADSSP30520 456 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 SLC16A2P36021 539 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 CRKP46108 304 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 KLK7P49862 253 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 SNAP25P60880 206 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 GTF2IP78347 998 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 NFYCQ13952 458 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 TBC1D10BQ4KMP7 808 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 PDCD4Q53EL6 469 aaKnown RBP12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 C11orf63Q6NUN7 778 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 DENND1BQ6P3S1 775 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 CREG2Q8IUH2 290 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 KBTBD2Q8IY47 623 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 KBTBD8Q8NFY9 601 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 NAT14Q8WUY8 206 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 PRRG3Q9BZD7 231 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 TUFT1Q9NNX1 390 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 IGSF1Q8N6C5 1336 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 DENND3A2RUS2 1198 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 EFCAB10A6NFE3 127 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 PLEKP08567 350 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 CDK7P50613 346 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 GPC3P51654 580 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 IFI35P80217 286 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 SPIRE1Q08AE8 756 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 PRKAA1Q13131 559 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 TCHHL1Q5QJ38 904 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 PERM1Q5SV97 790 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 AGAP9Q5VTM2 703 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 STOX1Q6ZVD7 989 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 SCFD2Q8WU76 684 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 RNFT2Q96EX2 444 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 UBXN6Q9BZV1 441 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 CLK4Q9HAZ1 481 aaKnown RBP12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 ZNF804BA4D1E1 1349 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 ANKARQ7Z5J8 1434 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 ENTPD5O75356 428 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 KRT36O76013 467 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 CPA3P15088 417 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 DLGAP5Q15398 846 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 PROSER3Q2NL68 480 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 POTEGQ6S5H5 508 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 EID3Q8N140 333 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 APPL2Q8NEU8 664 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 NARS2Q96I59 477 aaKnown RBP12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 PACSIN1Q9BY11 444 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 TMED5Q9Y3A6 229 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 CEP152O94986 1710 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 GZMAP12544 262 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 STAT3P40763 770 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 RXRGP48443 463 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 TNFAIP1Q13829 316 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 TYSND1Q2T9J0 566 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 C8orf59Q8N0T1 100 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 SPICE1Q8N0Z3 855 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 NSMCE2Q96MF7 247 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 GPAMQ9HCL2 828 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 DYRK4Q9NR20 520 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 ING3Q9NXR8 418 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 AFF2P51816 1311 aa12.16□□□□□ -0.46
CSPG4P12-201ENST00000558282 C15orf38-AP3S2A0A0A6YYH1 394 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 E9PBE3 544 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 SORBS3O60504 671 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 SEMA3DO95025 777 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 PHKG2P15735 406 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 RRM2P31350 389 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 SFNP31947 248 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 PDK1Q15118 436 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 QPRTQ15274 297 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 MAPK6Q16659 721 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 ACCSLQ4AC99 568 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 PI16Q6UXB8 463 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 ARPINQ7Z6K5 226 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 FEZF2Q8TBJ5 459 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 COPS7BQ9H9Q2 264 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 INTS13Q9NVM9 706 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 NCKIPSDQ9NZQ3 722 aa12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 EIF3LQ9Y262 564 aaKnown RBP12.15□□□□□ -0.46
CSPG4P12-201ENST00000558282 TELO2Q9Y4R8 837 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms