RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 DMAC2Q9NW81 257 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 GREB1Q4ZG55 1949 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 ANAPC1Q9H1A4 1944 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 NCOR2Q9Y618 2525 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 CLDN5O00501 218 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 SLC30A4O14863 429 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 ACTN4O43707 911 aaKnown RBP16.9■□□□□ 0.3
TUBB3-213ENST00000557262 YWHAQP27348 245 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 RAP1GAPP47736 663 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 CACNA2D1P54289 1103 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 CDH8P55286 799 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 PKP1Q13835 747 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 KMT5BQ4FZB7 885 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 ZNF667Q5HYK9 610 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 KBTBD6Q86V97 674 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 SLC9A9Q8IVB4 645 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 SPRYD3Q8NCJ5 442 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 TMEM174Q8WUU8 243 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 ACDQ96AP0 544 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 ARRDC1-AS1Q9H2J1 176 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 EXOC1Q9NV70 894 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 TMEM30AQ9NV96 361 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 USP25Q9UHP3 1055 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 ATG2BQ96BY7 2078 aa16.9■□□□□ 0.3
TUBB3-213ENST00000557262 LRRIQ3A6PVS8 624 aaPredicted RBP16.89■□□□□ 0.29
TUBB3-213ENST00000557262 PDXKO00764 312 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 SLC9A3R1O14745 358 aaPredicted RBP16.89■□□□□ 0.29
TUBB3-213ENST00000557262 RTN3O95197 1032 aaPredicted RBP16.89■□□□□ 0.29
TUBB3-213ENST00000557262 OLFM2O95897 454 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 OAS1P00973 400 aaKnown RBP16.89■□□□□ 0.29
TUBB3-213ENST00000557262 OPRD1P41143 372 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 NCOA4Q13772 614 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 DMC1Q14565 340 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 SGSM1Q2NKQ1 1148 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 ZNF699Q32M78 642 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 KIAA0895Q8NCT3 520 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 ZC3H10Q96K80 434 aaKnown RBP16.89■□□□□ 0.29
TUBB3-213ENST00000557262 TNIP3Q96KP6 325 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 HHIPQ96QV1 700 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 KCNK16Q96T55 309 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 KCTD10Q9H3F6 313 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 EBF1Q9UH73 591 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 CPQQ9Y646 472 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 ATP8B3O60423 1300 aa16.89■□□□□ 0.29
TUBB3-213ENST00000557262 SPTBN2O15020 2390 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 RALGAPA1Q6GYQ0 2036 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 GDF9O60383 454 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 APBB3O95704 486 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 RPN1P04843 607 aaKnown RBP16.88■□□□□ 0.29
TUBB3-213ENST00000557262 MYL1P05976 194 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 ZNF806P0C7X5 589 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 CMA1P23946 247 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 IFRD2Q12894 506 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-213ENST00000557262 PAQR9Q6ZVX9 377 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 FILIP1Q7Z7B0 1213 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 DDX42Q86XP3 938 aaKnown RBP eCLIP16.88■□□□□ 0.29
TUBB3-213ENST00000557262 PDZD8Q8NEN9 1154 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 TMC2Q8TDI7 906 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 OVCA2Q8WZ82 227 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 MED10Q9BTT4 135 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 SMYD3Q9H7B4 428 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 SMPD4Q9NXE4 827 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 CHORDC1Q9UHD1 332 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-213ENST00000557262 PTPRDP23468 1912 aa16.88■□□□□ 0.29
TUBB3-213ENST00000557262 SDK1Q7Z5N4 2213 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 A0A1B0GVL5 298 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 K7EQS6 105 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 CLSTN1O94985 981 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 EPN2O95208 641 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 VNN1O95497 513 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 MBL2P11226 248 aaPredicted RBP16.87■□□□□ 0.29
TUBB3-213ENST00000557262 DLG4P78352 724 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 DHCR24Q15392 516 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 GAB4Q2WGN9 574 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 USP33Q8TEY7 942 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 FBXO32Q969P5 355 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 SDCBP2Q9H190 292 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 COMMD8Q9NX08 183 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 IL37Q9NZH6 218 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 CFAP97Q9P2B7 532 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 TBC1D14Q9P2M4 693 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 PCDHGA5Q9Y5G8 931 aa16.87■□□□□ 0.29
TUBB3-213ENST00000557262 TNFRSF10BO14763 440 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 IKBKBO14920 756 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 NR3C1P04150 777 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 CYP17A1P05093 508 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 P4HA1P13674 534 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 PFKFB1P16118 471 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 ZACNQ401N2 412 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 PLK5Q496M5 336 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 AASDHQ4L235 1098 aaPredicted RBP16.86■□□□□ 0.29
TUBB3-213ENST00000557262 C2orf27AQ580R0 203 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 HECTD3Q5T447 861 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 SNX30Q5VWJ9 437 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 RHBDF2Q6PJF5 856 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 SV2AQ7L0J3 742 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 ACOT1Q86TX2 421 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 FAM35AQ86V20 835 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 CRYBG2Q8N1P7 616 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 C12orf50Q8NA57 414 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms