RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 LRRC15Q8TF66 581 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 GJA10Q969M2 543 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 CDHR1Q96JP9 859 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 PLEKHG4BQ96PX9 1271 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 IWS1Q96ST2 819 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 CEP89Q96ST8 783 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 RMDN3Q96TC7 470 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 TUBGCP2Q9BSJ2 902 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 TEX13BQ9BXU2 312 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 VPS16Q9H269 839 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 ZSWIM4Q9H7M6 989 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 AGO4Q9HCK5 861 aaKnown RBP4.88□□□□□ -1.63
SRP54-212ENST00000556992 KCNH7Q9NS40 1196 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 INTS13Q9NVM9 706 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 ZNHIT6Q9NWK9 470 aaKnown RBP4.88□□□□□ -1.63
SRP54-212ENST00000556992 RNF181Q9P0P0 153 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.88□□□□□ -1.63
SRP54-212ENST00000556992 FBXO40Q9UH90 709 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 TCEAL9Q9UHQ7 104 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 KCNG1Q9UIX4 513 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 STRIP2Q9ULQ0 834 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 OAZ3Q9UMX2 235 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 LUC7L2Q9Y383 392 aaKnown RBP4.88□□□□□ -1.63
SRP54-212ENST00000556992 R3HCC1Q9Y3T6 440 aaKnown RBP4.88□□□□□ -1.63
SRP54-212ENST00000556992 RPTORQ8N122 1335 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 KIAA1551Q9HCM1 1747 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 LAMA4Q16363 1823 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 SLX4Q8IY92 1834 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 ANKRD31Q8N7Z5 1873 aa4.88□□□□□ -1.63
SRP54-212ENST00000556992 COL4A5P29400 1685 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 A0A1W2PQU0 124 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 FRMD3A2A2Y4 597 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 IQCA1LA6NCM1 817 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 MATN2O00339 956 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 TRAF5O00463 557 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 PES1O00541 588 aaKnown RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 PDXKO00764 312 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 CETN3O15182 167 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 CALUO43852 315 aaPredicted RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 DKC1O60832 514 aaKnown RBP eCLIP4.87□□□□□ -1.63
SRP54-212ENST00000556992 EIF3JO75822 258 aaKnown RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 LYPLA2O95372 231 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 GJB6O95452 261 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 ENO2P09104 434 aaPredicted RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 TNNT1P13805 278 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 ATF4P18848 351 aaPredicted RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 CCND2P30279 289 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 ETFBP38117 255 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 QARSP47897 775 aaKnown RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 JAK3P52333 1124 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 ADKP55263 362 aaKnown RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 PSMC6P62333 389 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 RPS6P62753 249 aaKnown RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 UBXN2AP68543 259 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 COASYQ13057 564 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 PABPC4Q13310 644 aaKnown RBP eCLIP4.87□□□□□ -1.63
SRP54-212ENST00000556992 MTMR1Q13613 665 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 BAATQ14032 418 aaPredicted RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 CTTNQ14247 550 aaKnown RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 TBR1Q16650 682 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 KNOP1Q1ED39 458 aaKnown RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 EDRF1Q3B7T1 1238 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 MUM1L1Q5H9M0 696 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 SNRNP48Q6IEG0 339 aaKnown RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 B3GNT9Q6UX72 402 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 CYP26C1Q6V0L0 522 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 NSMFQ6X4W1 530 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 C1orf186Q6ZWK4 172 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 FASTKD5Q7L8L6 764 aaKnown RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 OTUD6AQ7L8S5 288 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 MIER3Q7Z3K6 550 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 PNMA8AQ86V59 439 aaPredicted RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 ERO1BQ86YB8 467 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 ANKRD13AQ8IZ07 590 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 C17orf53Q8N3J3 647 aaPredicted RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 ZNF808Q8N4W9 903 aaPredicted RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 MYCT1Q8N699 235 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 TC2NQ8N9U0 490 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 KIAA0895Q8NCT3 520 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 SLC17A8Q8NDX2 589 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 RDM1Q8NG50 284 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 KIF18AQ8NI77 898 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 UHMK1Q8TAS1 419 aaKnown RBP4.87□□□□□ -1.63
SRP54-212ENST00000556992 GOLGA5Q8TBA6 731 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 KCTD13Q8WZ19 329 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 EDAQ92838 391 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 DYDC2Q96IM9 177 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 TAAR1Q96RJ0 339 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 UIMC1Q96RL1 719 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 SENP7Q9BQF6 1050 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 PDCD2LQ9BRP1 358 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 TIPINQ9BVW5 301 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 EDEM3Q9BZQ6 932 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 BHMT2Q9H2M3 363 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 NDST4Q9H3R1 872 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 ZHX3Q9H4I2 956 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 ACAD9Q9H845 621 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 PXMP2Q9NR77 195 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 OLFML3Q9NRN5 406 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms