RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 DNAJC21Q5F1R6 531 aaKnown RBP19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 SH2D3CQ8N5H7 860 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 ART4Q93070 314 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 TNIP3Q96KP6 325 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 CALN1Q9BXU9 219 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 GOLGA6AQ9NYA3 693 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 GIT1Q9Y2X7 761 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 THSD7BQ9C0I4 1608 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 CASP8AP2Q9UKL3 1982 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 PPFIA2O75334 1257 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 SETSIPP0DME0 302 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 TFE3P19532 575 aaPredicted RBP19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 COPS2P61201 443 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 BYSLQ13895 437 aaKnown RBP19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 TRIM71Q2Q1W2 868 aaKnown RBP19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 MDH1BQ5I0G3 518 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 DSTYKQ6XUX3 929 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 ZNF365Q70YC5 407 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 GLIS1Q8NBF1 620 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 HASPINQ8TF76 798 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 GLT1D1Q96MS3 346 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 LRRC4CQ9HCJ2 640 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 DNAJC17Q9NVM6 304 aaKnown RBP19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 DDX43Q9NXZ2 648 aaKnown RBP19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 CST8O60676 142 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 BEST1O76090 585 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 ZSCAN5DPP0CG00 497 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 ETS1P14921 441 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 PTPN1P18031 435 aaKnown RBP19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 MMRN1Q13201 1228 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 PTK6Q13882 451 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 TXLNGYQ9BZA5 131 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 RSAD1Q9HA92 442 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 GPATCH2LQ9NWQ4 482 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 MTRF1LQ9UGC7 380 aaKnown RBP19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 GOLGA8KD6RF30 607 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 H0YGN5 161 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 TP73O15350 636 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 ATF2P15336 505 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 VEGFBP49765 207 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 PMS2P54278 862 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 RFX6Q8HWS3 928 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 REM2Q8IYK8 340 aaPredicted RBP19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 FUKQ8N0W3 1084 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 UHMK1Q8TAS1 419 aaKnown RBP19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 FAM172AQ8WUF8 416 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 PWWP2AQ96N64 755 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 MED10Q9BTT4 135 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 NFS1Q9Y697 457 aa19.19■□□□□ 0.66
SDR39U1-220ENST00000556548 IVDP26440 423 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 SDC4P31431 198 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 ITGA8P53708 1063 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 MTMR3Q13615 1198 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 MRPL10Q7Z7H8 261 aaKnown RBP19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 SNF8Q96H20 258 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 TMEM121Q9BTD3 319 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 NEU2Q9Y3R4 380 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 A0A0U1RQF3 1178 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 PRPSAP2O60256 369 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 CKBP12277 381 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 LMAN1P49257 510 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 APLP1P51693 650 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 ATXN1P54253 815 aaKnown RBP19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 CDH6P55285 790 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 PPARDQ03181 441 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 DSC3Q14574 896 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 ACAP1Q15027 740 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 CYP4V2Q6ZWL3 525 aaPredicted RBP19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 B4GALNT4Q76KP1 1039 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 SEMA4AQ9H3S1 761 aa19.18■□□□□ 0.66
SDR39U1-220ENST00000556548 CABYRO75952 493 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 PTPN7P35236 360 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 PCK1P35558 622 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 CHKAP35790 457 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 ZNF844Q08AG5 666 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 UPP1Q16831 310 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 LHX8Q68G74 356 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 PAQR9Q6ZVX9 377 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 PIGZQ86VD9 579 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 CMASQ8NFW8 434 aaPredicted RBP19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 STK32AQ8WU08 396 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 ADAM33Q9BZ11 813 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 CRTAC1Q9NQ79 661 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 GABRDO14764 452 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 B3GAT3O94766 335 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 SHBGP04278 402 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 RPLP2P05387 115 aaKnown RBP19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 GBP1P32455 592 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 OTUD4Q01804 1114 aaKnown RBP19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 TIGD5Q53EQ6 642 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 ZC3H12AQ5D1E8 599 aaKnown RBP19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 FAM182AQ5T1J6 154 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 SYDE1Q6ZW31 735 aaPredicted RBP19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 FAM76AQ8TAV0 307 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 ACTL9Q8TC94 416 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 EPB41L4BQ9H329 900 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 WHRNQ9P202 907 aa19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 BCCIPQ9P287 314 aaKnown RBP eCLIP19.17■□□□□ 0.66
SDR39U1-220ENST00000556548 ANAPC5Q9UJX4 755 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms