RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 HHLA1C9JL84 531 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 RHOP08100 348 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 YWHAQP27348 245 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 TKTL1P51854 596 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 PDCLQ13371 301 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 MEA1Q16626 185 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 CYP4A22Q5TCH4 519 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 HGSNATQ68CP4 663 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 WDTC1Q8N5D0 677 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 SMRP1Q8NCR6 262 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 PCDHB18PQ96TA0 734 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 MIS12Q9H081 205 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 S1PR5Q9H228 398 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 DEF6Q9H4E7 631 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 ZNF334Q9HCZ1 680 aaPredicted RBP14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 EHD2Q9NZN4 543 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 IMPACTQ9P2X3 320 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 BZW2Q9Y6E2 419 aaKnown RBP14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 TMCO5BA8MYB1 307 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 TNFRSF10BO14763 440 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 RTN3O95197 1032 aaPredicted RBP14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 LSM8O95777 96 aaKnown RBP14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 ABL1P00519 1130 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 HMGA1P17096 107 aaKnown RBP14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 WDR59Q6PJI9 974 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 TRIM72Q6ZMU5 477 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 VPS36Q86VN1 386 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 SLC30A5Q8TAD4 765 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 FBXO32Q969P5 355 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 PPP1R13BQ96KQ4 1090 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 CEP295NLQ96MC4 621 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 RIPOR3Q96MK2 946 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 GCNAQ96QF7 691 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 UBXN6Q9BZV1 441 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 ARHGAP20Q9P2F6 1191 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 COG5Q9UP83 839 aa14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 USP15Q9Y4E8 981 aaPredicted RBP14.8□□□□□ -0.04
VIPAS39-208ENST00000556412 A0A1W2PRU2 124 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 E5RJQ4 531 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 USP17L7P0C7H9 530 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 GJA1P17302 382 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 GABRR2P28476 465 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 HNRNPH3P31942 346 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 EIF4A3P38919 411 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 NSFP46459 744 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 KIF11P52732 1056 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 NOMO3P69849 1222 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 TFF2Q03403 129 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 TAF10Q12962 218 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 ARID5BQ14865 1188 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 IPO4Q8TEX9 1081 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 KCTD13Q8WZ19 329 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 HSFY1Q96LI6 401 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 SLITRK1Q96PX8 696 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 CPXM1Q96SM3 734 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 ULBP1Q9BZM6 244 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 ATXN3LQ9H3M9 355 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 FBXO44Q9H4M3 255 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 UXTQ9UBK9 157 aaPredicted RBP14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 ADAMTS1Q9UHI8 967 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 MRPS23Q9Y3D9 190 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 ATG2AQ2TAZ0 1938 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 MYO7AQ13402 2215 aa14.79□□□□□ -0.04
VIPAS39-208ENST00000556412 PLXNA3P51805 1871 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 CYP1A1P04798 512 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 POU2F2P09086 479 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 CLEC16AQ2KHT3 1053 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 C2CD6Q53TS8 623 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 CYP26C1Q6V0L0 522 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 GET4Q7L5D6 327 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 ERICH1Q86X53 443 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 TMC8Q8IU68 726 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 MSANTD4Q8NCY6 345 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 ING5Q8WYH8 240 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 NDRG1Q92597 394 aaKnown RBP14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 TCEAL4Q96EI5 215 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 CHP1Q99653 195 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 SYT11Q9BT88 431 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 GMIPQ9P107 970 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 TJP2Q9UDY2 1190 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 CHORDC1Q9UHD1 332 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 CLUHO75153 1309 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 GRXCR2A6NFK2 248 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 DDX3XO00571 662 aaKnown RBP eCLIP14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 ZBED1O96006 694 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 SP100P23497 879 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 FSHRP23945 695 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 MTHFRP42898 656 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 ACADSBP45954 432 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 CYP4F8P98187 520 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 SMAD4Q13485 552 aaKnown RBP14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 CBX2Q14781 532 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 SLC5A9Q2M3M2 681 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 PTPN20Q4JDL3 420 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 RAB41Q5JT25 222 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 MMS22LQ6ZRQ5 1243 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 CCDC186Q7Z3E2 898 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 SCUBE3Q8IX30 993 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 LEMD2Q8NC56 503 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms