RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 PCDHB4Q9Y5E5 795 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 PTPRDP23468 1912 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 KCNJ18B7U540 433 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 HHLA1C9JL84 531 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 ARNTLO00327 626 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 CHADO15335 359 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 USP17L7P0C7H9 530 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 CD19P15391 556 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 PFKLP17858 780 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 ACO1P21399 889 aaKnown RBP16.06■□□□□ 0.16
ACTN1-217ENST00000556203 PDE6CP51160 858 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 CLCN5P51795 746 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 STARD6P59095 220 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 GCNT1Q02742 428 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 PRKCQQ04759 706 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 KCNJ12Q14500 433 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 ZNF268Q14587 947 aaPredicted RBP16.06■□□□□ 0.16
ACTN1-217ENST00000556203 STX1AQ16623 288 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 PHLDB3Q6NSJ2 640 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 TRIM65Q6PJ69 517 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 TPRG1Q6ZUI0 275 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 GPRIN1Q7Z2K8 1008 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 TMEM105Q8N8V8 129 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 TTC16Q8NEE8 873 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 OVCA2Q8WZ82 227 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 FBXO44Q9H4M3 255 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 PNPLA8Q9NP80 782 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 TRPV5Q9NQA5 729 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 SAMSN1Q9NSI8 373 aaKnown RBP16.06■□□□□ 0.16
ACTN1-217ENST00000556203 THG1LQ9NWX6 298 aaKnown RBP16.06■□□□□ 0.16
ACTN1-217ENST00000556203 GMIPQ9P107 970 aa16.06■□□□□ 0.16
ACTN1-217ENST00000556203 CHORDC1Q9UHD1 332 aaPredicted RBP16.06■□□□□ 0.16
ACTN1-217ENST00000556203 PI15O43692 258 aa16.05■□□□□ 0.16
ACTN1-217ENST00000556203 PRKCSHP14314 528 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-217ENST00000556203 AOC1P19801 751 aa16.05■□□□□ 0.16
ACTN1-217ENST00000556203 GOLGA7BQ2TAP0 167 aa16.05■□□□□ 0.16
ACTN1-217ENST00000556203 ARHGAP29Q52LW3 1261 aa16.05■□□□□ 0.16
ACTN1-217ENST00000556203 SGO2Q562F6 1265 aa16.05■□□□□ 0.16
ACTN1-217ENST00000556203 GBP6Q6ZN66 633 aa16.05■□□□□ 0.16
ACTN1-217ENST00000556203 C11orf57Q6ZUT1 292 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-217ENST00000556203 ANKRD52Q8NB46 1076 aa16.05■□□□□ 0.16
ACTN1-217ENST00000556203 RIN3Q8TB24 985 aa16.05■□□□□ 0.16
ACTN1-217ENST00000556203 CSGALNACT1Q8TDX6 532 aa16.05■□□□□ 0.16
ACTN1-217ENST00000556203 KREMEN1Q96MU8 473 aa16.05■□□□□ 0.16
ACTN1-217ENST00000556203 TUBGCP2Q9BSJ2 902 aa16.05■□□□□ 0.16
ACTN1-217ENST00000556203 FOXQ1Q9C009 403 aa16.05■□□□□ 0.16
ACTN1-217ENST00000556203 UBE2TQ9NPD8 197 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-217ENST00000556203 ARHGAP26Q9UNA1 814 aa16.05■□□□□ 0.16
ACTN1-217ENST00000556203 FAM92AA1XBS5 289 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 GTPBP10A4D1E9 387 aaKnown RBP16.04■□□□□ 0.16
ACTN1-217ENST00000556203 RNF225M0QZC1 329 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-217ENST00000556203 OAS1P00973 400 aaKnown RBP16.04■□□□□ 0.16
ACTN1-217ENST00000556203 PAEPP09466 180 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 VDRP11473 427 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 SLC9A1P19634 815 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 PLCB2Q00722 1185 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 EXOC3L4Q17RC7 722 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 VWA3BQ502W6 1294 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 MIIPQ5JXC2 388 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 CAVIN1Q6NZI2 390 aaKnown RBP16.04■□□□□ 0.16
ACTN1-217ENST00000556203 CC2D1AQ6P1N0 951 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-217ENST00000556203 GJB7Q6PEY0 223 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 TTC30AQ86WT1 665 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 RBBP8NLQ8NC74 664 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-217ENST00000556203 SH3RF2Q8TEC5 729 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 DDX23Q9BUQ8 820 aaKnown RBP16.04■□□□□ 0.16
ACTN1-217ENST00000556203 RNF38Q9H0F5 515 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 NDST4Q9H3R1 872 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 TSPAN16Q9UKR8 245 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 KIAA1257Q9ULG3 409 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 PIAS3Q9Y6X2 628 aa16.04■□□□□ 0.16
ACTN1-217ENST00000556203 KANSL1LA0AUZ9 987 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 O00370 1275 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 CYP26A1O43174 497 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 OLFM2O95897 454 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 ZDHHC11BP0C7U3 371 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 KRT5P13647 590 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 CD72P21854 359 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 EEF1GP26641 437 aaKnown RBP16.03■□□□□ 0.16
ACTN1-217ENST00000556203 PON1P27169 355 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 PGFP49763 221 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 KIF11P52732 1056 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 SLC8A3P57103 927 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 SLC7A9P82251 487 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 APBA1Q02410 837 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 TNK2Q07912 1038 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 USP4Q13107 963 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 MTF1Q14872 753 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 UBXN2BQ14CS0 331 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 ZNF77Q15935 545 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 TCP11X2Q5H9J9 407 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 HECTD3Q5T447 861 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 SNX30Q5VWJ9 437 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 ZNF852Q6ZMS4 543 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 PIGZQ86VD9 579 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 TTC8Q8TAM2 541 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 TFAP2BQ92481 460 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 GKN1Q9NS71 199 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 SMPD4Q9NXE4 827 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 GTSE1Q9NYZ3 720 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms